PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10031595 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 212aa MW: 24181.3 Da PI: 8.0718 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.2 | 1.2e-09 | 9 | 114 | 34 | 128 |
NAM 34 ikevdiykv.ePwdLpk..kvkaeek...ewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgek 118 ++e d+y ePw+L + +++++++ +y F+k +kk+++ k+ +r + g W+ + +v++k ++ g k+ + + ++++++e+ Lus10031595 9 VQESDLYGDkEPWELWRdhQIRSHREpeeAIYLFTKLKKKSKNAKNFERRIGncGGNWHGEDS-GNVFVKfrggdGSMWAGKKRKFKYE-NKKSEAEH 104 67778885449****6334444433333256***********999888854445899**8776.4555555666444558899999886.888899** PP NAM 119 tdWvmheyrl 128 +W++ e+r+ Lus10031595 105 GKWLLSEFRV 114 ********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.971 | 1 | 133 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.45E-7 | 17 | 118 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MTPEQCYPVQ ESDLYGDKEP WELWRDHQIR SHREPEEAIY LFTKLKKKSK NAKNFERRIG 60 NCGGNWHGED SGNVFVKFRG GDGSMWAGKK RKFKYENKKS EAEHGKWLLS EFRVENVESE 120 SSFETAICMM KINGSPFAEK ELGKMMPRKR KLDDILDDFL HRGLEFPGPA LKKLQLDRKQ 180 SNSVGAAVPI VIQNETAAFQ ASGDGYDSVS E* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 151 | PRKRKL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10031595 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10031595 | 1e-157 | (Linum usitatissimum) |
Link Out ? help Back to Top | |
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Phytozome | Lus10031595 |