PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10030040
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family WRKY
Protein Properties Length: 615aa    MW: 64706.1 Da    PI: 7.269
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10030040genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.71.5e-20377417241
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v r 
  Lus10030040 377 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVRRG 417
                  7***************************99********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.9E-22361417IPR003657WRKY domain
SuperFamilySSF1182901.83E-18369418IPR003657WRKY domain
PROSITE profilePS5081120.794371416IPR003657WRKY domain
SMARTSM007741.7E-19376432IPR003657WRKY domain
PfamPF031065.8E-18378418IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    Send to blast
MARTSTRSGL SIDSPDLLTA PTTTTTSTTL PSHTRSSPAA TTTTPSSCRF LFSVGQAPTV  60
LNSLPLMDSS SSPAPEIIAQ PTTIQFVDDG GGADAGGGGG VCHLVHHRRK VIDEMDFFAQ  120
RNNNSDSVDL MSVDSDRRDG LELKVNTGLN LLTRNTSSEQ SVVDDGGGTS STNADDRRLK  180
TEVLNLQAEL DRMKVENLRL KDMLNQVNSS YAALQMHVMS LHHDQKPVPA PTAADVDDKK  240
ANGGGAMVPR QFMDLGLASS AIGAAGGTTG DTDDLSLSSS EGRSRDRSRS PTAANNNNDE  300
ASAAAAADVD SKKAIVEREE SPDQGGGGGG GGGWAGGASN KVARFNGSPN KSVDQTEATI  360
RKARVSVRAR SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMATGCPV RKQVRRGPYS  420
TDNNLRRDTH PPTPTGGDGN GVDDLVCGEN ASLRLNVQHR RTHELQFPHQ NPPPMLFKHG  480
HDLSFSSFPN CYIGPDPNAE PINRPPTTTA KPPTPAPLPH NRXXXXXXPV RGVAAAALLP  540
QLFGQALHNQ SKFSGLQMSQ DIDHNAAAAS LFSHAIQGGG SGGGGGGQNQ LADTAGAIAA  600
EPNFNAVLWG RSAQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10030040
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021673088.11e-110probable WRKY transcription factor 31
TrEMBLA0A140H8M01e-103A0A140H8M0_MANES; WRKY transcription factor 16
TrEMBLA0A2C9UPJ11e-103A0A2C9UPJ1_MANES; Uncharacterized protein
STRINGLus100300400.0(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.17e-38WRKY family protein