PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10025133
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family WRKY
Protein Properties Length: 322aa    MW: 35951.6 Da    PI: 6.126
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10025133genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.83.5e-21129191159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.EEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.vveitYegeHnhe 59 
                  +dDg++WrKYGqK++ +s+fpr+YYrCt++   +C+++k+v+  ++ pk +  +tY ++H+++
  Lus10025133 129 VDDGHQWRKYGQKTILKSDFPRHYYRCTHKndqKCEATKQVQMIQSHPKpMYRTTYYSRHTCT 191
                  59***************************99999********99888764889********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-22123193IPR003657WRKY domain
PROSITE profilePS5081118.119124193IPR003657WRKY domain
SuperFamilySSF1182903.53E-21126193IPR003657WRKY domain
SMARTSM007742.2E-31129192IPR003657WRKY domain
PfamPF031066.2E-23130190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEIIHPTPLN RKEAIHEILR GRDFTCQLRK LLLSTYESGG SSSSAEDLVA KILKSFTHTL  60
SILNSNNANY SEVSQCLDAP KSEISSGDST SCDKIISSST KDDRRGCSYK RRKTITLSES  120
WANESETLVD DGHQWRKYGQ KTILKSDFPR HYYRCTHKND QKCEATKQVQ MIQSHPKPMY  180
RTTYYSRHTC TNPMNYFFLD PPPSNDDVHL ISFSNNNNTA GTSSIKGEQH DSMMISSTPF  240
LASFPTSSPP SSSTSAAAAA EIVPLKQESS VDVGRQGGGS TQTENQSDVD DDDDYYQSET  300
SYMRMLMDPP TVDHGWFSEL S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-15129190868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10025133
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021684239.17e-60probable WRKY transcription factor 70
TrEMBLA0A061EIE65e-56A0A061EIE6_THECC; WRKY DNA-binding protein 70, putative isoform 1
STRINGLus100251330.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-30WRKY DNA-binding protein 70