PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10018591 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 107aa MW: 11849.5 Da PI: 9.7324 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 25.3 | 4.3e-08 | 11 | 71 | 6 | 66 |
NAM 6 rFhPtdeelvveyLkkkvegkk..leleevikevdiy.kvePwdLpkkvkaeekewyfFskrdk 66 F+P++++lv +yL k++g++ ++ +e+i+e+diy +++Pw++ + +e+ + y F++ ++ Lus10018591 11 NFDPSEKDLV-NYLWLKLNGQTipIPSNEFIPEIDIYgQLKPWEMFDR--NESARFYAFACLKS 71 6*********.9**********55556678******9456*****622..33345666665443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-6 | 11 | 76 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MAAAGVNLRR NFDPSEKDLV NYLWLKLNGQ TIPIPSNEFI PEIDIYGQLK PWEMFDRNES 60 ARFYAFACLK SRGGRRLRCP GVSAVPPAAE RGSSRTAPCS QRTAGF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10018591 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10018591 | 1e-73 | (Linum usitatissimum) |
Link Out ? help Back to Top | |
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Phytozome | Lus10018591 |