PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10017807 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 221aa MW: 25314.7 Da PI: 10.5188 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 22 | 4.4e-07 | 62 | 139 | 31 | 111 |
NAM 31 eevikevdiykv.ePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykg 111 + i+e+d+y Pw++ p ++++ + F+k k+a+ kr + + g Wk g+++ v k +++++g+kk + f k Lus10017807 62 LNLIHEIDLYGDkTPWEIfP-----GNDRFFTFTKL--KKASAKRVSWNLACGKWKWHGNNRGVDIKdaRERQIGIKKQFSFKKH 139 35799***997548***933.....33444445555..55556677777788999999999877666559999*********864 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-5 | 62 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MNGDPFKKVE KAELIDPRSL ARVWRSLRKF QKVMYFRWVF ALIRRRKNSS IITSRVKPKG 60 RLNLIHEIDL YGDKTPWEIF PGNDRFFTFT KLKKASAKRV SWNLACGKWK WHGNNRGVDI 120 KDARERQIGI KKQFSFKKHF SSDPALFDTS SRTLYRDLDD FFRLTEANAT ADLYMTIDQD 180 DSGSAAGTSS QSTSSLVVEG DNTGYKQLSS DPAFFDTSSS * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10017807 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10017807 | 1e-161 | (Linum usitatissimum) |
Link Out ? help Back to Top | |
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Phytozome | Lus10017807 |