PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lus10017700

Organism

Linum usitatissimum

Taxonomic ID

4006

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum

Family

VOZ

Protein Properties

Length: 440aa MW: 48474.8 Da PI: 5.6011

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lus10017700	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	362.7	1.3e-111	195	411	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaf+gpkcalwdctrpaqgse +yc s+h + a+ +g pg p++rpkgi +kd+ lf+al+ak+qgkevgip+c gaa+++spwna++lfd+ Lus10017700 195 PPPSAFMGPKCALWDCTRPAQGSESSMEYCCSLHCDAAVSDGGPGRPPTVRPKGIRMKDNFLFDALTAKIQGKEVGIPQCVGAASTRSPWNAPDLFDI 292 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeinelda.lalyrlelklvdekks 195 sl+e et+rew+ffd+pr+a++sg+rkqrslpdy+grgwhesrkqv+ g +krsyymdpqpsss+ewhlyey++ ++da +aly+le+kl+++kk+ Lus10017700 293 SLFEEETLREWVFFDEPRKAYDSGSRKQRSLPDYKGRGWHESRKQVIS-PGCQKRSYYMDPQPSSSHEWHLYEYQVINSDAsCALYKLEYKLAEAKKT 389 ******************************************96.699*******************99999659*********** PP VOZ 196 akgkvskdsladlqkklgrlta 217 ++gkvsk sladlq k+ rl+a Lus10017700 390 PRGKVSKASLADLQMKMNRLNA 411 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MGGVLAGFPM QNGQKSKSHH HIKDIAKNWV NDHEGRLSDL RAAVREGRQR DFEVLAEQVF 60 QSIGELRTEL DAPTPASSLL VEDDATSVPA QFPVMEPQHG TEQINESHPL GDFTAYHDGF 120 LGSAGTQNHD FHGFDQTAGG FLDAFDSIET KPSDLSAYFD SDQYIDFDYG LPVDINPNKG 180 FIKETQSSKP SYVSPPPSAF MGPKCALWDC TRPAQGSESS MEYCCSLHCD AAVSDGGPGR 240 PPTVRPKGIR MKDNFLFDAL TAKIQGKEVG IPQCVGAAST RSPWNAPDLF DISLFEEETL 300 REWVFFDEPR KAYDSGSRKQ RSLPDYKGRG WHESRKQVIS PGCQKRSYYM DPQPSSSHEW 360 HLYEYQVINS DASCALYKLE YKLAEAKKTP RGKVSKASLA DLQMKMNRLN ADGTPDSSPS 420 NGSTKLNVKS ESSPSGTVP*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MGGVLAGFPM QNGQKSKSHH HIKDIAKNWV NDHEGRLSDL RAAVREGRQR DFEVLAEQVF  60
QSIGELRTEL DAPTPASSLL VEDDATSVPA QFPVMEPQHG TEQINESHPL GDFTAYHDGF  120
LGSAGTQNHD FHGFDQTAGG FLDAFDSIET KPSDLSAYFD SDQYIDFDYG LPVDINPNKG  180
FIKETQSSKP SYVSPPPSAF MGPKCALWDC TRPAQGSESS MEYCCSLHCD AAVSDGGPGR  240
PPTVRPKGIR MKDNFLFDAL TAKIQGKEVG IPQCVGAAST RSPWNAPDLF DISLFEEETL  300
REWVFFDEPR KAYDSGSRKQ RSLPDYKGRG WHESRKQVIS PGCQKRSYYM DPQPSSSHEW  360
HLYEYQVINS DASCALYKLE YKLAEAKKTP RGKVSKASLA DLQMKMNRLN ADGTPDSSPS  420
NGSTKLNVKS ESSPSGTVP*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lus10017700

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021691248.1	1e-149	transcription factor VOZ1-like
TrEMBL	B9IQS1	1e-147	B9IQS1_POPTR; VOZ family protein
STRING	Lus10017700	0.0	(Linum usitatissimum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-111	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Lus10017700