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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lus10017554 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family |
GRAS |
Protein Properties |
Length: 542aa MW: 61024 Da PI: 6.1106 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lus10017554 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 395.3 | 6.4e-121 | 170 | 541 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l+++L+ cA+a++ d ++a l+ l++++s g+p+qR+ ay++e+L+arl s+s++y+al++ + ss+ ++++ ++++++P+ kf+++ a
Lus10017554 170 LKQVLIGCAQAIDMVDISKAAGLMHMLEQMVSVCGEPIQRVGAYILEGLRARLELSGSRIYRALKCDSPV---SSDLMTYMGILYQICPYWKFAYMSA 264
5799**************************************************************9998...89999999***************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
N I eav+ e r+HiiDf+i qG QW++L+q+La Rp+g+p +RiTgv++++s + l+ +gerL+k+A+e++v fef+ +a + +++ e+L
Lus10017554 265 NVVIHEAVQYEPRIHIIDFQIAQGSQWIPLIQSLARRPGGAPIIRITGVDDSQSAhaRGGGLHIVGERLSKVAAECNVVFEFHD-TAMEGCEIQREHL 361
***************************************************9988889999***********************.899999******* PP
GRAS 195 rvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
+v+p +Ea++Vnl + lh+++desv++ ++rd++L+lvkslsP++v++veqe+++n+++F rfle+leyy+a+f+s+++ pr++++ri+ E+++++
Lus10017554 362 KVEPlREAVVVNLPYVLHHMPDESVNTWNHRDRLLRLVKSLSPRIVTLVEQESNTNTTPFHLRFLETLEYYTAMFESIDVARPRDDKQRISAEQHCVA 459
************************************************************************************************** PP
GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
r+ivnv+acegaer+erhe l+kWr+r+++aGF+++p+s+++++ ++ +l+ ++ + yrvee++g+l+l+W +r++ + SaWr
Lus10017554 460 RDIVNVIACEGAERVERHEVLGKWRSRFQMAGFSQYPFSSSVTAAVRDVLKDYDRR-YRVEERDGALYLYWLRRAMGTSSAWR 541
******************************************************66.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 542 aa
Download sequence Send
to blast |
MTQSQKHRNS PTIHGFYHQP IKEEDTFSLS QIELLDNNNI FSIVGSQGGG PSISFQNYKD 60 EYFTLESSST TTTTGFIYDS PGVSSSSRSP FSPQGSLSCL TDPHHSPDGS PASGSSYATD 120 PGNVLWQKLR EMEMSLLGPE SENFCFSNES HSLERLDADQ IAEMIPRLDL KQVLIGCAQA 180 IDMVDISKAA GLMHMLEQMV SVCGEPIQRV GAYILEGLRA RLELSGSRIY RALKCDSPVS 240 SDLMTYMGIL YQICPYWKFA YMSANVVIHE AVQYEPRIHI IDFQIAQGSQ WIPLIQSLAR 300 RPGGAPIIRI TGVDDSQSAH ARGGGLHIVG ERLSKVAAEC NVVFEFHDTA MEGCEIQREH 360 LKVEPLREAV VVNLPYVLHH MPDESVNTWN HRDRLLRLVK SLSPRIVTLV EQESNTNTTP 420 FHLRFLETLE YYTAMFESID VARPRDDKQR ISAEQHCVAR DIVNVIACEG AERVERHEVL 480 GKWRSRFQMA GFSQYPFSSS VTAAVRDVLK DYDRRYRVEE RDGALYLYWL RRAMGTSSAW 540 R*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |