PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10017283 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | bZIP | ||||||||
Protein Properties | Length: 175aa MW: 19517.3 Da PI: 9.8708 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.4 | 7.4e-09 | 93 | 114 | 7 | 28 |
HHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaei 28 +r++kNRe+A rsR+RK++ i Lus10017283 93 HKRRIKNRESADRSRARKQELI 114 59*****************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-12 | 84 | 148 | No hit | No description |
SMART | SM00338 | 0.0033 | 84 | 164 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.3E-4 | 90 | 111 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.85E-14 | 93 | 144 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MEQVWQDISM CPLQDNSTPP PPAATQGHQI GNLHDFFTAA DRTPPEPPIS QKGITFPPFS 60 HLVGSPVFQG ISSPTMVGSK PADKKSLSGE QWHKRRIKNR ESADRSRARK QELIPLYSLF 120 SFSSSAYTQE LELKVDQLKK ENAKLRRLLH LELEVVGAEL PKKNTLCRTL TAPF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10017283 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10017283 | 1e-126 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 5e-15 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Lus10017283 |