PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10009924 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 20820.3 Da PI: 7.0401 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66 | 1.1e-20 | 6 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlsk 95 lp G+rF+P+d++l+ +yL +k+++++ ++i+e+d+y+v e w+ ++++e+e+yf++k ++k++ +g++ +r +Wk++ +d ++ Lus10009924 6 LPLGYRFEPSDSDLILNYLYPKATSSNSYQ-DFIPECDLYDVqESWKR--YFHGGETEMYFYTKLKRKKTekNGHHMERGYGGRVWKSQKEDLVYYTD 100 699********************9999655.99********9455655..5788999******9888876446889999888888***9998877776 PP NAM 96 ...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 k++++ ++++ + +g+ + ++ +Wvmhe+rl Lus10009924 101 negKKTKMRSRRSFSYKvtdgygEGTGDN-SNDEWVMHEFRL 141 75555557777788887776654444444.6899******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-20 | 3 | 143 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.819 | 6 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-13 | 7 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MKIPGLPLGY RFEPSDSDLI LNYLYPKATS SNSYQDFIPE CDLYDVQESW KRYFHGGETE 60 MYFYTKLKRK KTEKNGHHME RGYGGRVWKS QKEDLVYYTD NEGKKTKMRS RRSFSYKVTD 120 GYGEGTGDNS NDEWVMHEFR LGEVLGGGKS KESDQFAWVF YSMVYIVYDC LHGCSIAT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10009924 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10009924 | 1e-131 | (Linum usitatissimum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 3e-13 | NAC domain containing protein 57 |
Link Out ? help Back to Top | |
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Phytozome | Lus10009924 |