 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lus10005078 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
|
| Family |
GRAS |
| Protein Properties |
Length: 419aa MW: 46717.9 Da PI: 7.5743 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lus10005078 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 310.9 | 2.8e-95 | 33 | 417 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfsh 95
l+elLl+cA++ +sg+l l++a+L+++s+las +gd+mqRlaa f+ ALa+rl+ ++++y al+ ++ + + +l ++lfs+++P+l f++
Lus10005078 33 LIELLLKCATH-ASGNLDLVDACLSEISTLASISGDSMQRLAARFASALATRLLTsRWPGIYTALNYTRGHAPPcdVGIQLRRRSLFSQAFPYLSFTY 129
689*******7.568*************************************98879********888766554336666777788************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
+ +++l+ v +e++vH +D+d + W++Ll+++a ++g+p +++T v+s + le++g++L k Ae lg++f+f +l +++dl++
Lus10005078 130 AIIARTLLQVVTHERAVHLVDLDSGDLKLWVPLLRSFARLSNGSPqlVIKVTCVSS----NGSVLEKLGQQLVKEAEVLGLSFRFVPL-KIAMQDLRP 222
**************************************9999999556799*****....99*************************6.779****** PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsles..........erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
+++v +gEala +vl+lh ll+e+ ++ + ++L +++s+sPk + vveqea+hns+++++r++e l+yysa+fds++++++ +
Lus10005078 223 GMIKVVSGEALAFISVLNLHVLLAEEDVHQNvdrrpkfggrHMGDFLGMIRSMSPKALFVVEQEANHNSNRLVDRVVEGLHYYSAVFDSIDSTFGVGT 320
***********************5544333333344455567899*********************************************99976544 PP
GRAS 280 ...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
e+r+++E++ +g ei+n+vaceg er+erhe+++kW +r++ aGF+p ++ ++ ++ak ++ +++ gy++ +++ s++++W+drpL++++ W+
Lus10005078 321 seqEDRTMMEEM-FGDEIENMVACEGVERVERHEKYSKWAMRMSGAGFRPFRMWYNSDEEAKQMVDAFGKAGYKIVNDRTSIMICWHDRPLYALTTWT 417
455778888888.************************************************************************************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MPLQKPDVTL SLTLPPSSAA APRLSSEQRG IRLIELLLKC ATHASGNLDL VDACLSEIST 60
LASISGDSMQ RLAARFASAL ATRLLTSRWP GIYTALNYTR GHAPPCDVGI QLRRRSLFSQ 120
AFPYLSFTYA IIARTLLQVV THERAVHLVD LDSGDLKLWV PLLRSFARLS NGSPQLVIKV 180
TCVSSNGSVL EKLGQQLVKE AEVLGLSFRF VPLKIAMQDL RPGMIKVVSG EALAFISVLN 240
LHVLLAEEDV HQNVDRRPKF GGRHMGDFLG MIRSMSPKAL FVVEQEANHN SNRLVDRVVE 300
GLHYYSAVFD SIDSTFGVGT SEQEDRTMME EMFGDEIENM VACEGVERVE RHEKYSKWAM 360
RMSGAGFRPF RMWYNSDEEA KQMVDAFGKA GYKIVNDRTS IMICWHDRPL YALTTWTC*
|
