PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lus10004206 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
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Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 24856 Da PI: 10.3579 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.3 | 1.4e-10 | 71 | 102 | 96 | 127 |
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 + + g k+t+vfykg+apkg+kt+W +hey+ Lus10004206 71 VEVALGEKRTMVFYKGKAPKGRKTHWKIHEYK 102 456799*************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 11.89 | 1 | 132 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.32E-11 | 71 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MAFHFSAQNC QQAEIGRRWR KGKISSGSSL GGCKRGKEEE GGRSGLLGAG IGKPRVHLAT 60 STAVVVLIIN VEVALGEKRT MVFYKGKAPK GRKTHWKIHE YKAFVNPQHQ QQQQQQSLQL 120 RHEYSLIRLY KKSRCLRSLD RRPVGIFQLQ PISTTSTTAS TSTAHSHTNN QLLLNITTPP 180 ADQQADRNDD DAAAANHRDR EPSGFWGYLQ ELDLHFNGDD NL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lus10004206 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Lus10004206 | 1e-167 | (Linum usitatissimum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.2 | 9e-15 | NAC domain containing protein 61 |
Link Out ? help Back to Top | |
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Phytozome | Lus10004206 |