PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lsa017868
Organism
Lactuca sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
Family bZIP
Protein Properties Length: 343aa    MW: 38749.8 Da    PI: 9.4651
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Lsa#S58687710PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.3e-13269308544
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                +r +r++kNRe+A rsR+RK+a++ eLe +v++L++e ++
  Lsa017868 269 RRHKRMIKNRESAARSRARKQAYTLELEAEVEKLKEEVQK 308
                689*********************************9764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-12264315No hitNo description
SMARTSM003386.0E-11265329IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875267313IPR004827Basic-leucine zipper domain
PfamPF001703.8E-11269313IPR004827Basic-leucine zipper domain
CDDcd147071.70E-20269317No hitNo description
SuperFamilySSF579592.18E-10269318No hitNo description
PROSITE patternPS000360272287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MSSFINFKNC KPMVANSSLT EQSSIYALTF GELQNTFGGN GEDFGSMNID ELLKKIWTTE  60
ETQSMTSNSN LGINGKFQKQ GSLILPRTIS QKKVDEIWRD CLKENGGFKD VDLIKEPTIQ  120
PQEKQPTLGE MTLEAFLQRA GAISENNQTQ GFKNVIQNQG FRQEAVVTEG KNDNLQGVGS  180
SKVQKLQKIL PKQSAFNFRS SVNLVNNNHM SSRENGVSII GKIGHSIKTD YPSDLYQNGN  240
LDMSPSPPPC YGGSYEGKRS GVLEKVVERR HKRMIKNRES AARSRARKQA YTLELEAEVE  300
KLKEEVQKKQ DEIMESQHFQ IWEKTKLTEN GRLCLRRTMT GPW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023754710.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X1
RefseqXP_023754711.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X1
TrEMBLA0A2J6LYC30.0A0A2J6LYC3_LACSA; Uncharacterized protein
STRINGXP_010066019.12e-84(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.34e-57ABRE binding factor 4