PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lsa010229 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||
Protein Properties | Length: 222aa MW: 23967.5 Da PI: 9.2274 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.8 | 6.2e-10 | 195 | 222 | 5 | 32 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLe 32 +r +r++kNRe+A rsR+RK+a++ eLe Lsa010229 195 RRHKRMIKNRESAARSRARKQAYMNELE 222 689************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.657 | 193 | 222 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.01E-6 | 195 | 222 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-8 | 195 | 222 | No hit | No description |
Pfam | PF00170 | 2.7E-8 | 195 | 222 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.20E-17 | 195 | 222 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 198 | 213 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
SDHSGCGGDD VNNLNTNHHN LNRASRRSTT LSSSSSSTTS SNHSPFSAPL SVNQIRSPNA 60 TRTMEEVWKD INLSTTNHPA DGNKGYRGFI LQDFLAKPFS NNDTPTTLSS PGYGSPSPPP 120 PPPPPVSQPS MLLNLNSGPD QLNFLVDGPT RTVCPLDVPF DHVMGSSNSS SGLLGQSIGG 180 MRMLPETDRI GGGERRHKRM IKNRESAARS RARKQAYMNE LE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023739549.1 | 1e-163 | bZIP transcription factor 27-like | ||||
TrEMBL | A0A2J6MBC3 | 1e-161 | A0A2J6MBC3_LACSA; Uncharacterized protein | ||||
STRING | XP_010266024.1 | 1e-27 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-13 | bZIP family protein |