PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Lsa007598 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||||||
Protein Properties | Length: 366aa MW: 41788.7 Da PI: 8.9038 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3.2e-11 | 77 | 108 | 3 | 34 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 ++k +rr+++NReAAr+sR+RKka++++Le Lsa007598 77 SDKLQRRLAQNREAARKSRLRKKAYVQQLESG 108 589**************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-6 | 75 | 145 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.7E-8 | 76 | 124 | No hit | No description |
PROSITE profile | PS50217 | 8.99 | 77 | 121 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.8E-8 | 78 | 113 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.54E-7 | 79 | 114 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 82 | 97 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 6.6E-25 | 168 | 239 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MASTSTQFVT SRRMGIYDPL QQISMWDDGF GANLNPNTSP GMMMMTQVDS RLANKTEYNS 60 QESLEPSPEA RATKTISDKL QRRLAQNREA ARKSRLRKKA YVQQLESGRL KLVQLEQELE 120 RARRQGAYGG LLNTGNSLLS GNVMNAGIAT FEMEYELWIG EQRKKDDDLR KVLLTHTSDV 180 ELRMFVDTGL NHYYDLFRMK ADAAKADVFY LLNGLWRTPV ERFFQWIGGF RPSELLYILI 240 PQIELTDTQL VKARGLRQSC EQAEEALSQG MEKLQQTLAQ SITIDITGAG SYTTQMNCAL 300 ERLEALEIFL NQADHLRQQT LQQMYQILTL RQAAKALLAL GEYFQRLRVL SSIWSGRPHD 360 RGTLLS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023770891.1 | 0.0 | transcription factor TGA1-like | ||||
Refseq | XP_023770892.1 | 0.0 | transcription factor TGA1-like | ||||
Refseq | XP_023770893.1 | 0.0 | transcription factor TGA1-like | ||||
Refseq | XP_023770894.1 | 0.0 | transcription factor TGA1-like | ||||
Refseq | XP_023770895.1 | 0.0 | transcription factor TGA1-like | ||||
Swissprot | Q39237 | 1e-139 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A2J6KYA8 | 0.0 | A0A2J6KYA8_LACSA; Uncharacterized protein | ||||
STRING | VIT_18s0001g04470.t01 | 1e-159 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-140 | bZIP family protein |