PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lsa006314 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | CPP | ||||||||
Protein Properties | Length: 153aa MW: 16550.6 Da PI: 9.3803 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 26.7 | 1.1e-08 | 124 | 151 | 2 | 29 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCse 29 ++k+CnC++s+ l +YCeCfa +C+ Lsa006314 124 KRKQCNCTHSRSLTLYCECFAMAIYCDG 151 789***********************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 7.3E-4 | 123 | 152 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 9.635 | 124 | 153 | IPR005172 | CRC domain |
Pfam | PF03638 | 3.2E-6 | 126 | 150 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MEKGEGGGDS NFPPKTNQSD AAEVSTATPM DIPAAKKLAR QLDFNSIGSS VPPAASMART 60 QVVLPEHPQR PVVVHVQHPA PPPPPPQPKQ SLLQQQQPLR PLKPESPKAR ARQNAEGKDG 120 TTKKRKQCNC THSRSLTLYC ECFAMAIYCD GSX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023735842.1 | 2e-76 | protein tesmin/TSO1-like CXC 5 | ||||
TrEMBL | A0A2J6KAV9 | 7e-75 | A0A2J6KAV9_LACSA; Uncharacterized protein | ||||
STRING | XP_010105053.1 | 1e-29 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 1e-18 | Tesmin/TSO1-like CXC domain-containing protein |