PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lsa002096 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||
Protein Properties | Length: 258aa MW: 28565.2 Da PI: 4.7295 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.9 | 5.2e-09 | 126 | 174 | 3 | 51 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +k+ +r +N+ AA rsR+RKk++++ Le k+ eae k+L + l+ Lsa002096 126 LDKKRKRQLRNKDAALRSRERKKMYVKDLEMKSRYYEAECKRLGSMLQC 174 689*************************************999887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-11 | 120 | 186 | No hit | No description |
SMART | SM00338 | 1.0E-6 | 124 | 188 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.404 | 126 | 183 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.2E-7 | 127 | 182 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 128 | 186 | No hit | No description |
CDD | cd14704 | 2.88E-16 | 129 | 180 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEEQIDWDNL FDFDASFSDP SPNPILPISS PNHANSQSPL SVDDIEQLLL NDDDETHNAD 60 ALNSVQDAVD VFFHDILLDS PLDVEKSGEV VDISDGDNSV EDQNNEAIVD HKEEKENSDD 120 DPNDPLDKKR KRQLRNKDAA LRSRERKKMY VKDLEMKSRY YEAECKRLGS MLQCFIAENQ 180 ALRFSLHSSK AYNASTTKQE SAXALLGIPA VGFPALVGVH SLPARSSQPA PAKTRGSSTG 240 NRGRRKATTK SGCKEGGK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023743807.1 | 1e-146 | bZIP transcription factor 60 | ||||
TrEMBL | A0A2J6JTL5 | 1e-144 | A0A2J6JTL5_LACSA; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 2e-19 | basic region/leucine zipper motif 60 |