PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TF ID | Lsa001051 | ||||||||||||||||
Organism | |||||||||||||||||
Taxonomic ID | |||||||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
|
||||||||||||||||
Family | bZIP | ||||||||||||||||
Protein Properties | Length: 252aa MW: 28149 Da PI: 4.8866 | ||||||||||||||||
Description | bZIP family protein | ||||||||||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.2 | 2.4e-10 | 175 | 222 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR R +++i eLe+ v +L++e ++L ++ l Lsa001051 175 KRVKRILANRQSAQRSRVRTLQYISELERSVTTLQTEVSTLSPRVAFL 222 8999**********************************9998777655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.7E-11 | 171 | 235 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.197 | 173 | 236 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-10 | 175 | 229 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-12 | 175 | 227 | No hit | No description |
Pfam | PF00170 | 8.1E-9 | 175 | 220 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.42E-24 | 176 | 226 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 178 | 193 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence Send to blast |
MAQNWPSFAY QMMSVPSSAA QPPNWVDEFL DFSAARRNSH RRSVSDPIAF IESPFIEGCR 60 NSNGINNSLM PCSNNNGFER LDDEQFSSMF PDEDVAANLP STRSTSSNPS TPSDQNSDKD 120 DAKPTPPPEQ LQQHHHQPKN EPEEVEDGGD CQPETESGKP CFNFSSEGTT IVDPKRVKRI 180 LANRQSAQRS RVRTLQYISE LERSVTTLQT EVSTLSPRVA FLDHQRLVLN VDNSALKQRI 240 AALAPDKIFK DA |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_023765017.1 | 0.0 | basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 2e-74 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A2J6MF28 | 0.0 | A0A2J6MF28_LACSA; Uncharacterized protein | ||||
STRING | EOY13162 | 4e-94 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-67 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|