PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lsa000919 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family | bZIP | ||||||||
Protein Properties | Length: 251aa MW: 27247.9 Da PI: 7.6736 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.4 | 2.4e-16 | 172 | 230 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+e +L ke++el+ke k ++ Lsa000919 172 QQKQRRMIKNRESAARSRERKQAYTVELEALVTQLEEEHAKLLKEVDELNKERLKQLMQ 230 689*************************************************9887666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-16 | 165 | 231 | No hit | No description |
SMART | SM00338 | 1.5E-16 | 169 | 233 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.5E-15 | 171 | 231 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.829 | 171 | 223 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 8.15E-19 | 173 | 220 | No hit | No description |
SuperFamily | SSF57959 | 1.88E-11 | 173 | 225 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MASSSPANQD LQRHQAFGLT DHNSNLISMN MDDLLKNIYE DSRQAPGSFP AGAGGGKTMD 60 ERLKEIVDGS VGDPEMTLED FLTKAGAVRE EDVVKLPPVS ASAVISEYPG VVDPIICGGA 120 GAGAGAGASF QVMPQQHMQF GSAIGTSAGT SGGGRGKRKV VVEDPPVDKA TQQKQRRMIK 180 NRESAARSRE RKQAYTVELE ALVTQLEEEH AKLLKEVDEL NKERLKQLMQ NLVPVLEKRR 240 PPRVLRRTNS M |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023740550.1 | 0.0 | bZIP transcription factor 12-like isoform X1 | ||||
TrEMBL | A0A2J6K0M9 | 0.0 | A0A2J6K0M9_LACSA; Uncharacterized protein | ||||
STRING | XP_009615514.1 | 2e-68 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 2e-30 | G-box binding factor 4 |