PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR12G02630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | NAC | ||||||||
Protein Properties | Length: 68aa MW: 7522.64 Da PI: 10.3116 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 23.4 | 1.6e-07 | 32 | 63 | 2 | 34 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevi 34 +pG++ Ptdeelv+ yL+ k+eg++ +l ++i LPERR12G02630.1 32 APGYHLAPTDEELVDIYLRSKIEGRRPPL-HFI 63 69**********************99776.444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-8 | 23 | 64 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.468 | 31 | 68 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-5 | 33 | 64 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MEIGGGDGPA ARPPPATGRS RKHKMVPQLT FAPGYHLAPT DEELVDIYLR SKIEGRRPPL 60 HFINAFRS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR12G02630.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D9XWU8 | 3e-42 | A0A0D9XWU8_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR12G02630.1 | 6e-43 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11556 | 21 | 37 |