PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR11G02100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | NAC | ||||||||
Protein Properties | Length: 127aa MW: 14672.6 Da PI: 4.7908 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 31.3 | 5.8e-10 | 12 | 101 | 32 | 126 |
NAM 32 evikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121 + i+++d+y eP+dL v+ e+ + +fF++ ++++ ++r++ +g+W + ev++++g +vg +++ f + g+ t+W LPERR11G02100.1 12 SLIHHADLYGGEPNDLAGmfapVVRCENGDRFFFTSCKRQNG----SERKAGDGTWVWLNN-MEVKNEEGVKVGEMQSFRFM----KYGRYTEW 96 4699************843666555566688***99988764....6788899***98765.889999*************9....67889*** PP NAM 122 vmhey 126 vm+e LPERR11G02100.1 97 VMEEH 101 ***96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.915 | 1 | 123 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.16E-14 | 9 | 123 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-5 | 33 | 100 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MSEFVFDRVT PSLIHHADLY GGEPNDLAGM FAPVVRCENG DRFFFTSCKR QNGSERKAGD 60 GTWVWLNNME VKNEEGVKVG EMQSFRFMKY GRYTEWVMEE HPCAVQQAKA TDEEPVICRM 120 YMSPMLD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR11G02100.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015619129.1 | 9e-50 | NAC domain-containing protein 41 | ||||
TrEMBL | A0A0D9XNW6 | 6e-92 | A0A0D9XNW6_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR11G02100.1 | 1e-92 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1832 | 27 | 99 |