PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR10G03460.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family G2-like
Protein Properties Length: 544aa    MW: 59043.9 Da    PI: 4.0464
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR10G03460.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.25.7e-111992282655
          G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       A P++ile+m+vkgL ++hv+S LQkYR 
  LPERR10G03460.1 199 DARPRKILEHMNVKGLKRQHVASYLQKYRK 228
                      689**************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.12E-5194232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.6E-11198231IPR009057Homeodomain-like
TIGRFAMsTIGR015574.5E-8198230IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MEEQTMLSFF PGGLRLMMVD DNTEAENTPN YPVVATCSTA CAGMQALFGD KVVDVQAVLC  60
DMHKVVSSGI DFRRIVETNL RIPVIYLLSM EDTTEDDELE FLDYLLQTST YIVRKPLNHT  120
MMTHLWRVVA WRKCYLEENM ATPTDEDAAE GGGEDGDDVI IVEEPQVHLR AMRCNRNQKR  180
GLDLNDEEDN SDNTYDSADA RPRKILEHMN VKGLKRQHVA SYLQKYRKKQ QKKDNQQDER  240
SPLRSWDPLL LKDLLPMLKA PPLNPLILNA GGAGPSSVVA AALPADGSVA TVPFEAPVQQ  300
HQQTHLSCNT AINFNSNTAI NYNDNASISF SNAASPVPAK EQQQSGGVQL DVDLQQKQQK  360
LSMGPFSYQG PTPPAMENRI SLLMDNDEHK SPLIELPFGQ PVDDLLIRAG SLMAPPIDAS  420
GQIAATEGQG SGAGAVVVAS EENAATAAPN IAEPNIVPDL QVAADAAPIA SEGDITFTLE  480
EILGLDDDVA MPLEDGGADA AAAAGSEEGG MDNGWDIDLD LDWLNMDNSN DVAFPLDDEL  540
AGSD
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR10G03460.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649246.11e-129LOW QUALITY PROTEIN: two-component response regulator ORR32-like
SwissprotQ6ZC031e-124ORR33_ORYSJ; Two-component response regulator ORR33
TrEMBLA0A0D9XID50.0A0A0D9XID5_9ORYZ; Uncharacterized protein
STRINGLPERR10G03460.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP484222
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]