PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR09G02990.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 426aa    MW: 47536.3 Da    PI: 5.8286
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR09G02990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM639.1e-20131388126
              NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlsk 95 
                      hPt+ el v++L++++++ k++++++i+e+d+y+v+P dL +    +++++   wyfFs+ ++++ +   r+ + a + g W++    k+v ++
  LPERR09G02990.1  13 HPTELELAVKHLNPRAHRIKTNESNFIHEADVYDVDPADLTAkfppAHATDGVYWYFFSPVRNQAGRrRVRSVKsADNGGCWHSEAGVKAVEDE 106
                      8*****************99999899**************84366544456669*****998876531334444345699************** PP

              NAM  96 kgelvglkktLvfy.kgrapkgektdWvmhey 126
                      +++ vg ++ + f  kg++ k  +t W+m e 
  LPERR09G02990.1 107 HKRRVGHRQFFSFTkKGDDGKRYRTGWIMVEI 138
                      *************9556888889******996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.1316155IPR003441NAC domain
SuperFamilySSF1019411.05E-2713155IPR003441NAC domain
PfamPF023651.0E-1013137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MVDACQSVSS SRHPTELELA VKHLNPRAHR IKTNESNFIH EADVYDVDPA DLTAKFPPAH  60
ATDGVYWYFF SPVRNQAGRR RVRSVKSADN GGCWHSEAGV KAVEDEHKRR VGHRQFFSFT  120
KKGDDGKRYR TGWIMVEIGL DHEPNDVVLC KVYKTPRKPS GVMPSAMMEI HGEKRKMTDD  180
DAELPPQQRR RLLAEEETQE DGSEENSGES STVPSTLADV ADLADDDDVG RLEETTSSDD  240
DDDDCVMLPD PPSQGEVVST QRETLPNTIG DGTVADDDNC RHQRSAVPDL NIDATMSEED  300
KHEDHYARNG RQHGSTLGSI TKETTSTSNS TMAATERITS TRSIPDECRR RHTLKLHMVN  360
DGMEQQRQQA ATPAWPYGGG GRLQWQQGQR APCFYIVVRP CAAHSSLRYG TTYRCGCRVT  420
GSFSKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR09G02990.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9XC600.0A0A0D9XC60_9ORYZ; Uncharacterized protein
STRINGLPERR09G02990.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1745799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.17e-09NAC domain containing protein 35