PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR08G19600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | bZIP | ||||||||
Protein Properties | Length: 140aa MW: 15281.1 Da PI: 10.0509 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 6e-16 | 56 | 109 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr rr++kNRe+A rsR+RK+a+++eLee+ L aeN +L+++ +lk +ak LPERR08G19600.1 56 KRKRRAMKNRESAERSRARKQAYLQELEEELRLLRAENAQLRDQCHQLKAAAAK 109 9***********************************************998886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-8 | 52 | 116 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.576 | 54 | 104 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-12 | 56 | 108 | No hit | No description |
Pfam | PF00170 | 4.9E-13 | 56 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.57E-11 | 56 | 106 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 59 | 74 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MERAGSGGAG AGDAATIMST AAVAPAARRQ LEHELLYRAE LHQQQQESRG GGRVEKRKRR 60 AMKNRESAER SRARKQAYLQ ELEEELRLLR AENAQLRDQC HQLKAAAAKA AEAEAAAAEQ 120 QEAAAAMEAP TLKRTLSATF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR08G19600.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649649.1 | 4e-32 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
TrEMBL | A0A0D9XAL0 | 2e-89 | A0A0D9XAL0_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR08G19600.1 | 3e-90 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15193 | 17 | 19 |