Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 97.5 | 2e-30 | 17 | 157 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkya....tgkrknr.atk.sgyWk.at 86
lppGfrFhPtdeelv +yL++k+ g +l++ vi+++ ++yk++Pwd+p a+e e yfF+ r ++ g +++r at+ g Wk a
LPERR08G18520.1 17 LPPGFRFHPTDEELVLQYLRRKAFGLPLPA-AVIPDLhNLYKLDPWDIP---GASEGERYFFAMRPAASGgaggGGGKNRRqATAsGGCWKpAG 106
79****************************.8899998***********...3456799******999876665344555555553789**666 PP
NAM 87 gkdkevlsk...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
g+dk+v+++ +++lvg+kk +vf ++ a + Wvmhey+l
LPERR08G18520.1 107 GRDKPVVAArcgGSHLVGVKKGMVFVprrqgkTAAAAAAAGGCWVMHEYSL 157
78****9998988999**********87744323444455678******97 PP
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-27 | 17 | 183 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-27 | 17 | 183 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-27 | 17 | 183 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-27 | 17 | 183 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swm_B | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swm_C | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swm_D | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swp_A | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swp_B | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swp_C | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
3swp_D | 9e-27 | 17 | 183 | 20 | 170 | NAC domain-containing protein 19 |
4dul_A | 9e-27 | 17 | 183 | 17 | 167 | NAC domain-containing protein 19 |
4dul_B | 9e-27 | 17 | 183 | 17 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK061543 | 4e-88 | AK061543.1 Oryza sativa Japonica Group cDNA clone:006-311-A02, full insert sequence. |
GenBank | AK067906 | 4e-88 | AK067906.1 Oryza sativa Japonica Group cDNA clone:J013126H02, full insert sequence. |
GenBank | AK068776 | 4e-88 | AK068776.1 Oryza sativa Japonica Group cDNA clone:J013160K11, full insert sequence. |
GenBank | AK104766 | 4e-88 | AK104766.1 Oryza sativa Japonica Group cDNA clone:001-038-H11, full insert sequence. |
GenBank | CT829331 | 4e-88 | CT829331.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110N11, full insert sequence. |
GenBank | CT829332 | 4e-88 | CT829332.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114M05, full insert sequence. |
GenBank | EU846997 | 4e-88 | EU846997.1 Oryza sativa Japonica Group clone KCS078C08 NAC4 protein mRNA, complete cds. |