PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR08G09130.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 354aa    MW: 39131.5 Da    PI: 5.947
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR08G09130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.72.8e-2081371128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 
                      l+pG++F+P+de+lv+++L + +++++++l  + + + d  ++ Pw+L  ++ +++e++ yf +++d     g r++ra +  +g W ++  ++
  LPERR08G09130.1   8 LTPGYKFQPSDEQLVQHFLLPYLREQPVPLLGAaVVRDDPRSAPPWELFaRNGRGDEDDAYFLAPADG----GGRQSRALAggRGKWITQRLER 97 
                      579************************99988779999**********73344455668899999876....67888855423888*9988776 PP

              NAM  91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +       +g++v  k+ L f+ g+ + g +t Wvmhe+++
  LPERR08G09130.1  98 TAELVlagSGSVVFEKHRLNFHAGEGRCG-STGWVMHEFAV 137
                      654444458999**********9999997.9********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-283155IPR003441NAC domain
PROSITE profilePS5100528.0238155IPR003441NAC domain
PfamPF023651.4E-1410136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAAARVGLTP GYKFQPSDEQ LVQHFLLPYL REQPVPLLGA AVVRDDPRSA PPWELFARNG  60
RGDEDDAYFL APADGGGRQS RALAGGRGKW ITQRLERTAE LVLAGSGSVV FEKHRLNFHA  120
GEGRCGSTGW VMHEFAVVKP AMLGARHRAC HIAFTGHGQK RQRVPNSVGG GEASTAASPP  180
SSTCTAITQH VPVNDQQIST QDYASQYKEE RYNEPEPKRM KLERDCCKQQ HYLPPPAPVQ  240
INQDQQCHDC DQQGCFLPEQ GNQEQKYCYN EGHFLPQLID QEQANYDAQH HLALAAGALP  300
QHGEHMTTSQ LRNDHGDGTA AVPQSGGDED MALELTLTQE DWVSLFGEDF FPVR
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR08G09130.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649258.11e-101uncharacterized protein LOC107275324
TrEMBLA0A0D9X6R00.0A0A0D9X6R0_9ORYZ; Uncharacterized protein
STRINGLPERR08G09130.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143261123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.24e-13NAC domain containing protein 47