PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G13540.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 353aa    MW: 38259.3 Da    PI: 4.1274
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G13540.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.68.8e-1851461127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk......kvka..eekewyfFskrdkkyatgk...rknratk. 79 
                      l pG+ F P+d  lv++yL +k++g++   l ++ ++++vd+y++ P +L +      +  +  + k wyfF++  k ++ gk   r++r++  
  LPERR07G13540.1   5 LLPGLSFLPSDTVLVDRYLLPKIAGTSlddLGCKAFMHDVDVYSLPPDELTAkyehapT--GtdGAKVWYFFCPITKPKNAGKgtiRRSRTIGg 96 
                      579***********************9655445557**************853454432..0446779******99988877632344444333 PP

              NAM  80 .sgyW.katgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyr 127
                         +W ++ g++kev     +  g  + +++ +++a+ g+ k  W+m ey 
  LPERR07G13540.1  97 dIKRWyHSEGSKKEVNG-CAAIGGYYQKFTYKEKTASGGNvKPGWLMTEYG 146
                      32246268899999998.99999*********88777765599*******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-254164IPR003441NAC domain
PROSITE profilePS5100525.525164IPR003441NAC domain
PfamPF023658.3E-127146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MAAPLLPGLS FLPSDTVLVD RYLLPKIAGT SLDDLGCKAF MHDVDVYSLP PDELTAKYEH  60
APTGTDGAKV WYFFCPITKP KNAGKGTIRR SRTIGGDIKR WYHSEGSKKE VNGCAAIGGY  120
YQKFTYKEKT ASGGNVKPGW LMTEYGVAPE HGGTDMVLCK IYMSPRAPSR KRKAAEEEHV  180
DAPPPTVQRV AQAAVEEEET ASCSWGAAPI AEAEQGDTTG NGWDDIDMTE LFNGDTEVEP  240
VRANEEDQTE TTTHTPPLSS CELAAGDEES NNGWERNDVD MTALFSSIDD DLDLNALFNG  300
EFNDLFFLES SSSMPEPSTA AAIQPAEEQS GQIFFSDAGY SIDDLFDCAA ACG
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G13540.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9WZF10.0A0A0D9WZF1_9ORYZ; Uncharacterized protein
STRINGLPERR07G13540.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.13e-12NAC domain containing protein 64