PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

LPERR07G13470.1

Organism

Leersia perrieri

Taxonomic ID

77586

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia

Family

NAC

Protein Properties

Length: 509aa MW: 54874.6 Da PI: 10.2869

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
LPERR07G13470.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.1	6.6e-14	140	267	14	127
NAM 14 lvveyLkkkvegkk....leleevikevdiykvePwdLpkkvka......eekewyfFskrdkkya.tgkrknratk..sgyWkatgkdkevls 94 lv++yL +k++g++ + + ++++vd+y++ P +L +k+k+ + k wyfF++ k ++ + r++r++ s W ++ +k+v++ LPERR07G13470.1 140 LVDRYLLPKITGSSlddlASSKAFMHDVDVYSLPPDELTAKYKHaptgsdGAKVWYFFCPITKPKNgRTARRSRTIGgdSTKWYHSEGSKKVVN 233 899********97664344446**********8533333444446779**9877543134455554434477899999999999 PP NAM 95 kkgelvglkktLvfykgrapkge.ktdWvmheyr 127 + g + +++ +++a+ g+ k W+m ey LPERR07G13470.1 234 GCAAIGGYFQKFTYKEKTASGGNvKPGWLMTEYG 267 889999999***988777765599*****6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF11321	2.0E-18	40	105	IPR021470	Protein of unknown function DUF3123
PROSITE profile	PS51005	17.076	127	319	IPR003441	NAC domain
Pfam	PF02365	5.0E-8	140	267	IPR003441	NAC domain
SuperFamily	SSF101941	4.84E-18	140	273	IPR003441	NAC domain
Pfam	PF11321	3.6E-20	415	493	IPR021470	Protein of unknown function DUF3123

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence Send to blast
MAVPRSSPRD LDRRKKLAVN KSSAAAPAVT SVSFKKGDVV SVRTPLGRLG PTTMRLVMWL 60 GATVVSDTTD DGHLNVIYSG DFPRDDPFRT VRVATKDVKF PAVAAVDSAA PRGRPTTAGK 120 SLRLLKNLVK ETRAKAFYVL VDRYLLPKIT GSSLDDLASS KAFMHDVDVY SLPPDELTAK 180 YKHAPTGSDG AKVWYFFCPI TKPKNGRTAR RSRTIGGDST KWYHSEGSKK VVNGCAAIGG 240 YFQKFTYKEK TASGGNVKPG WLMTEYGVAP EHGGADMKFT YKEKTASGGN VKPGWLMTEY 300 GVAPEHGGAD MVLCKIYMSP RAPSRKRKAA EEEHVDAPPP TVQRVTQVAV EEEETASCSW 360 GAAAPRMNDS TLAHAMALHR SSARDLDSRK KLAVKKAPAP APAVTSVSFK KGDVVRVRTP 420 LGRLGRTTKR LVMWLGAVVV SAADDDGHLE VIYRCNFPRD DPFQTVRVAT TDVKFPASAT 480 AVVDNAGRTT RPAAVDHGGQ VAAAAAEEA

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence Send to blast

MAVPRSSPRD LDRRKKLAVN KSSAAAPAVT SVSFKKGDVV SVRTPLGRLG PTTMRLVMWL  60
GATVVSDTTD DGHLNVIYSG DFPRDDPFRT VRVATKDVKF PAVAAVDSAA PRGRPTTAGK  120
SLRLLKNLVK ETRAKAFYVL VDRYLLPKIT GSSLDDLASS KAFMHDVDVY SLPPDELTAK  180
YKHAPTGSDG AKVWYFFCPI TKPKNGRTAR RSRTIGGDST KWYHSEGSKK VVNGCAAIGG  240
YFQKFTYKEK TASGGNVKPG WLMTEYGVAP EHGGADMKFT YKEKTASGGN VKPGWLMTEY  300
GVAPEHGGAD MVLCKIYMSP RAPSRKRKAA EEEHVDAPPP TVQRVTQVAV EEEETASCSW  360
GAAAPRMNDS TLAHAMALHR SSARDLDSRK KLAVKKAPAP APAVTSVSFK KGDVVRVRTP  420
LGRLGRTTKR LVMWLGAVVV SAADDDGHLE VIYRCNFPRD DPFQTVRVAT TDVKFPASAT  480
AVVDNAGRTT RPAAVDHGGQ VAAAAAEEA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	LPERR07G13470.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0D9WZD9	0.0	A0A0D9WZD9_9ORYZ; Uncharacterized protein
STRING	LPERR07G13470.1	0.0	(Leersia perrieri)