PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G13460.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 244aa    MW: 26767 Da    PI: 4.6202
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G13460.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.41.1e-1751441127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpkkvka......eekewyfFskrdkkya.tgkrknratk..sgy 82 
                      l pG+ F P+++ l+++yL++k++g++   l ++ ++++vd+y + P +L +k+++      + k wyfF++  k ++ +  r++r++     +
  LPERR07G13460.1   5 LLPGLSFLPSESVLLDRYLQPKIAGSSlddLGCKAIMHDVDVYLLPPDELTAKYEHapagsdGAKVWYFFCPITKPKNgRTARRSRTICgdIRR 98 
                      579************************655555568**************8533333444446779*****98775531344555543322346 PP

              NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyr 127
                      W ++  +k+v++   ++ g  + +++ +++++ g+ k  W+m ey 
  LPERR07G13460.1  99 WYHSEGSKKVVNGCAAVGGYYQKFTYKEKTESGGNvKPGWLMTEYG 144
                      9988888999998999999*******977665554499*******6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-253162IPR003441NAC domain
PROSITE profilePS5100526.0425162IPR003441NAC domain
PfamPF023658.2E-127144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MAPPLLPGLS FLPSESVLLD RYLQPKIAGS SLDDLGCKAI MHDVDVYLLP PDELTAKYEH  60
APAGSDGAKV WYFFCPITKP KNGRTARRSR TICGDIRRWY HSEGSKKVVN GCAAVGGYYQ  120
KFTYKEKTES GGNVKPGWLM TEYGVTPEHG GVDLVLCKIY MSPRAPSRKR KAAEEEHVDA  180
PPPTVQRVLQ AIVEEEEETA SCGDAPTVVE AAEEQGDASG NGWDDIDMTE LFNGDTEDEP  240
VRSD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G13460.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9WZD80.0A0A0D9WZD8_9ORYZ; Uncharacterized protein
STRINGLPERR07G13460.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.12e-08NAC domain containing protein 64