PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G12620.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 346aa    MW: 37650.7 Da    PI: 8.1679
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G12620.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.92.7e-0814106792
              NAM   7 FhPtdeelvveyLkkkvegkklel..eevikev.diykvePwdLpk...kvka....eekewyfFskrdkkyatgkrknratksgy..Wkatgk 88 
                      F Pt+ el+++ L++k++g  ++   ++ ++++ d++ + P +L +   +  a    ++k wyfFs+r  +  +    + +  +g+  W   g+
  LPERR07G12620.1  14 FLPTEGELLHCLLRPKIAGAYIDSrfTHLVHDIhDVFALTPDHLAAmhtH--ApgarGDKVWYFFSTRIGSGGR---GRMVGGDGTkrWFPVGS 102
                      99******************95552144599999**********842331..25555788******99776544...33333333333777777 PP

              NAM  89 dkev 92 
                      +ke+
  LPERR07G12620.1 103 KKEL 106
                      7765 PP

2NAM38.82.9e-121602837127
              NAM   7 FhPtdeelvveyLkkkvegkk..leleevikev.diykvePwdLpk...kvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                      F Ptd el+++ L++k++g     ++++ +++v d++ + P +L +   +  a    ++k wyfFs+r  +  +g+r      s +W + g++k
  LPERR07G12620.1 160 FLPTDGELLHCLLRPKIAGAYidSRFTDLVHDVdDVFALPPDQLAAahsH--ApgarGDKAWYFFSTRIGSGGHGRRVGGD-GSKRWCSVGSKK 250
                      99******************944444567999999*********843441..24455788*******99877666555553.4567******** PP

              NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      e+   +    g  + + + +++++  +   W+m ey 
  LPERR07G12620.1 251 ELAG-G---GGYCRRFRYREKTEKGVVAPGWMMLEYG 283
                      *998.3...477888999887777778999******6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.5118151IPR003441NAC domain
SuperFamilySSF1019413.53E-1412139IPR003441NAC domain
PfamPF023653.2E-513132IPR003441NAC domain
PROSITE profilePS5100523.539154306IPR003441NAC domain
SuperFamilySSF1019411.44E-21158306IPR003441NAC domain
PfamPF023651.1E-8160283IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MDPSAAAEEF SIPFLPTEGE LLHCLLRPKI AGAYIDSRFT HLVHDIHDVF ALTPDHLAAM  60
HTHAPGARGD KVWYFFSTRI GSGGRGRMVG GDGTKRWFPV GSKKELAGWG GYCRRLRRKG  120
VVAPGWMMLE YGVVAQEHAG SEDGISELTM ASETEFPIPF LPTDGELLHC LLRPKIAGAY  180
IDSRFTDLVH DVDDVFALPP DQLAAAHSHA PGARGDKAWY FFSTRIGSGG HGRRVGGDGS  240
KRWCSVGSKK ELAGGGGYCR RFRYREKTEK GVVAPGWMML EYGVVAQEHA VGDGIAELVL  300
CKIFRSPRWH SGSPSSSTSA SASVGRKRKA GEFSGREMPD AAFSED
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G12620.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658578.15e-58PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A0D9WZ200.0A0A0D9WZ20_9ORYZ; Uncharacterized protein
STRINGLPERR07G12620.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017