PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR07G12470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | NAC | ||||||||
Protein Properties | Length: 186aa MW: 20032.9 Da PI: 9.7236 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.6 | 1.9e-13 | 14 | 136 | 7 | 127 |
NAM 7 FhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLpk...kvka....eekewyfFskrdkkyatgkrknratksgy..Wkatgkd 89 F Ptd e++++ L++k++g ++ ++ ++++d++++ P +L + + a ++k wyfFs+r + g r +r+ +g W g++ LPERR07G12470.1 14 FLPTDGEILHCLLRPKIAGAYIDSrfTHLVHDADVFSLPPDQLAAmhaH--ApgarGDKAWYFFSTRVGS---GGRGRRVGGDGSkrWCPVGSK 102 99******************9555214459*************843331..25555788******99765...66777776655444******* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 ke+ + g + + + +++a + W+m ey LPERR07G12470.1 103 KELAG-G---GGYCQRFRYREKTATGVVAPGWMMVEYG 136 **998.3...48889999999999999999*******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.539 | 8 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.48E-24 | 13 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.6E-9 | 14 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MDPAAAAKEF PIPFLPTDGE ILHCLLRPKI AGAYIDSRFT HLVHDADVFS LPPDQLAAMH 60 AHAPGARGDK AWYFFSTRVG SGGRGRRVGG DGSKRWCPVG SKKELAGGGG YCQRFRYREK 120 TATGVVAPGW MMVEYGVAQE HAVGDLVLCK IFRFPRSAHS DSKSPASASA SIGRKRKAET 180 LLCSDG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR07G12470.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006658578.1 | 2e-56 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | A0A0D9WZ02 | 1e-133 | A0A0D9WZ02_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR07G12470.1 | 1e-134 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15395 | 10 | 17 |