PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G10040.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 297aa    MW: 31729.1 Da    PI: 4.0841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G10040.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.21.1e-25121351128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d++lv+ yL ++++g++l+l+ vi ++d +++ Pw+L +++    +e +fF+k++ k+++gkr+nr +   g+W+ +       
  LPERR07G10040.1  12 LLPGFKFNPSDDDLVTSYLLRRLQGNPLPLHGVILNADPLSSPPWKLLAEYG-LGDEGFFFAKARAKNSKGKRQNRtVEGGGFWQGQRMCGGES 104
                      579***************************99***************85554.46789******************555599**9776644443 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +   + k +L f+ ++ +kg ++ Wvmhe+++
  LPERR07G10040.1 105 V--EGISWRKYMLSFF-AEGEKG-SSGWVMHEFAV 135
                      3..4568889999999.455554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-2810141IPR003441NAC domain
PROSITE profilePS5100526.4212169IPR003441NAC domain
PfamPF023653.6E-1614134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MAAGGGADGD GLLPGFKFNP SDDDLVTSYL LRRLQGNPLP LHGVILNADP LSSPPWKLLA  60
EYGLGDEGFF FAKARAKNSK GKRQNRTVEG GGFWQGQRMC GGESVEGISW RKYMLSFFAE  120
GEKGSSGWVM HEFAVTSPPD LASSPFSGHG KKRRREPESD EAETTAPKRT RAEDALLQEL  180
VPPLPALVDG DGSDGADQCC SSVTDESSTV FGDLSDLSTL PTEEAAVGDS TAGTSSLGEI  240
QNNSLSGVMN GEHLALCDFG FPESMDELFS CMDFNTADTS LLDMDFSMDD LFDLPAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G10040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025882797.16e-87NAC transcription factor 32
TrEMBLA0A0D9WY450.0A0A0D9WY45_9ORYZ; Uncharacterized protein
STRINGLPERR07G10040.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.19e-17NAC domain containing protein 94