PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G10030.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 285aa    MW: 30827.4 Da    PI: 4.189
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G10030.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.38.3e-25121351128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d++lv+ yL ++++g++l+l+ vi e+d +++ Pw+L +++ +  +e +fF++++ k+ +gkr++r +   g+W+ +       
  LPERR07G10030.1  12 LLPGFKFNPSDDDLVTSYLLHRLQGNPLPLHGVILEADPLTTPPWKLLAEH-GLGDEGFFFAEARAKNGKGKRQKRtVEGGGFWQGQRMCGGGG 104
                      579***************************99***************7443.445789******************555599**9776655444 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +   + k +L f+ ++ +kg ++ Wvmhe+++
  LPERR07G10030.1 105 V--EGISWSKYMLSFF-AEGEKG-SSGWVMHEFAV 135
                      4..456899*******.445554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-2910154IPR003441NAC domain
PROSITE profilePS5100527.86112154IPR003441NAC domain
PfamPF023659.0E-1614134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MAAGGGADGD GLLPGFKFNP SDDDLVTSYL LHRLQGNPLP LHGVILEADP LTTPPWKLLA  60
EHGLGDEGFF FAEARAKNGK GKRQKRTVEG GGFWQGQRMC GGGGVEGISW SKYMLSFFAE  120
GEKGSSGWVM HEFAVTSPPE LASSPVRLYR VRFSGHGRKR RREPESEEAS TIAPKRTRTE  180
DALLQELVPP ADEGCSSVMD ESSMVFGDLP ELIDLSAEEA DAAGTCLSQE EIQNKSLSGI  240
VDGEAPALCD FDIPESLDEV FDCIDFSFLD TIDFSMDGLF DLPAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G10030.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.19e-88uncharacterized protein LOC107275325
RefseqXP_025882797.18e-89NAC transcription factor 32
TrEMBLA0A0D9WY440.0A0A0D9WY44_9ORYZ; Uncharacterized protein
STRINGLPERR07G10030.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.19e-15NAC family protein