PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G08580.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 279aa    MW: 30404.2 Da    PI: 4.5144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G08580.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.56.3e-24121351128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d+ lv+ yL ++++g++l+l+ vi ++d +++ Pw+L + + +  +e +fF++ + k+++gkr++r +   g+W+ +   +   
  LPERR07G08580.1  12 LLPGFKFNPSDDALVTSYLLPRLQGNPLPLHGVILDADPLTTPPWKLLADH-GLGDEGFFFAEIRAKNTKGKRQKRtVEGGGFWQGQRMCRGGG 104
                      579***************************99***************7443.345789******************555599***887766665 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +   + k +L f+ ++ +kg +t Wvmh++++
  LPERR07G08580.1 105 V--EGISWSKYMLSFF-AEGEKG-STGWVMHNFTI 135
                      5..556899*******.445554.8*******986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-2710154IPR003441NAC domain
PROSITE profilePS5100527.5912154IPR003441NAC domain
PfamPF023655.6E-1514134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAAGGGADGD GLLPGFKFNP SDDALVTSYL LPRLQGNPLP LHGVILDADP LTTPPWKLLA  60
DHGLGDEGFF FAEIRAKNTK GKRQKRTVEG GGFWQGQRMC RGGGVEGISW SKYMLSFFAE  120
GEKGSTGWVM HNFTITSPPK LASSPVRLYR VRFSGHGKKR RREPQSDEAE TTAPKRTRTE  180
DALLQELHWL APIRTAPALF GDLPELIDLS AEEADAAGSS LPLEEIQSNS LSGVVDGEAP  240
ALCDFEIPES LDELFECIDF SFLDTMNFSM DGLFDLPAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G08580.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.11e-76uncharacterized protein LOC107275325
RefseqXP_025882797.18e-78NAC transcription factor 32
TrEMBLA0A0D9WXL90.0A0A0D9WXL9_9ORYZ; Uncharacterized protein
STRINGLPERR07G08580.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.14e-13NAC family protein