PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G08570.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 299aa    MW: 32287 Da    PI: 4.0768
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G08570.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31e-21121281128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d++lv+ yL ++++gk+l+l+ vi ++d +++ Pw+L + + +  +e +fF++ + k+ +gk ++r ++  g+W+ +      +
  LPERR07G08570.1  12 LLPGFKFNPSDDDLVTSYLLPRLQGKPLPLHGVILDADPLSSPPWKLLADH-GLGNEGFFFAEVRAKNGKGKCQKRtVVCGGFWQGQRM----C 100
                      579***************************99***************7443.456899******************77789***96533....3 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           +   k +L f+ ++ +kg ++ Wvmhe+ +
  LPERR07G08570.1 101 -----DFRSKYMLNFF-AEGEKG-SSGWVMHEFVV 128
                      .....46789******.445554.89*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-2610147IPR003441NAC domain
PROSITE profilePS5100519.43412147IPR003441NAC domain
PfamPF023651.0E-1414127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MAAGGGADGD GLLPGFKFNP SDDDLVTSYL LPRLQGKPLP LHGVILDADP LSSPPWKLLA  60
DHGLGNEGFF FAEVRAKNGK GKCQKRTVVC GGFWQGQRMC DFRSKYMLNF FAEGEKGSSG  120
WVMHEFVVTS PPELASSPVR LYRVRFSGHG KKPRREPQSD EAETTTPKRT RAEDSLLQEL  180
VPPLPALVDG DGSESSDSTD QGCSSVMDES STVFGDLSEL INLPAEEADV DDSASGTSSL  240
DEIQNNSLSG VMDGEALALC DFVLPESMDE LFSCIDFTAV PSLLEMDFSM DDLFDLPAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G08570.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.14e-82uncharacterized protein LOC107275325
TrEMBLA0A0D9WXL80.0A0A0D9WXL8_9ORYZ; Uncharacterized protein
STRINGLPERR07G08570.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.13e-11NAC domain containing protein 94