PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G08560.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 466aa    MW: 50526.1 Da    PI: 5.8527
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G08560.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.51.5e-24121351128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d+elv+ yL ++++g++l+l+++i ++d +++ Pw+L +++ +  +e +fF++++ k+++gkr++r +   g+W+ +       
  LPERR07G08560.1  12 LLPGFKFNPSDDELVTSYLLRRLQGNPLPLHSAILDADPLRSPPWKLLAEH-GLGDEGFFFAEARAKNNKGKREKRtVEGGGFWQGQRMCGGGG 104
                      579***************************999**************7443.445789******************555599**9776654444 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +   + k  L f++ + +kg ++ Wvmhe+++
  LPERR07G08560.1 105 V--EGISWSKYLLSFFS-EGEKG-SSGWVMHEFAV 135
                      4..456899999****4.44443.89*******86 PP
2NAM79.95.5e-252743971128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F+P+d++lv+ yL ++++g++l+l+ vi ++d++++ Pw+L +++ +  +e +fF++ ++k+++gkr++r +   g+W+ +      +
  LPERR07G08560.1 274 LLPGFKFNPSDDNLVTSYLIRRLQGNPLPLHGVILDADLLNSPPWKLLAEH-GLGDEGFFFAEVRSKNTKGKRQKRtVEGGGFWQGQRMCGGGC 366
                      579***************************99***************7443.445789******************555599***998877776 PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +   + k +L f+ ++ +kg ++ Wvmhe+++
  LPERR07G08560.1 367 V--EGISWNKYMLSFF-AEGEKG-SSGWVMHEFSI 397
                      6..567999*******.445554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-2810154IPR003441NAC domain
PROSITE profilePS5100528.47312154IPR003441NAC domain
PfamPF023656.1E-1614134IPR003441NAC domain
SuperFamilySSF1019415.49E-28270416IPR003441NAC domain
PROSITE profilePS5100528.635274416IPR003441NAC domain
PfamPF023656.9E-15276397IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MAAVGGADGD SLLPGFKFNP SDDELVTSYL LRRLQGNPLP LHSAILDADP LRSPPWKLLA  60
EHGLGDEGFF FAEARAKNNK GKREKRTVEG GGFWQGQRMC GGGGVEGISW SKYLLSFFSE  120
GEKGSSGWVM HEFAVTSPPE LASSPVRLYR VRFSGHGKKR RREPESDQAA TTAPKRTRAE  180
DALLQELVPP LPALVDVGDG SDGADQGCSS VMDESSMVFG DLPELIDLSA EEAVAAGICS  240
SLEEIQNKSL SGVVDGEAPA LSMVAGGGAD GDGLLPGFKF NPSDDNLVTS YLIRRLQGNP  300
LPLHGVILDA DLLNSPPWKL LAEHGLGDEG FFFAEVRSKN TKGKRQKRTV EGGGFWQGQR  360
MCGGGCVEGI SWNKYMLSFF AEGEKGSSGW VMHEFSITSP PELASSPVRL YRVRFSGHGE  420
NLNLTRLHQQ RPSAQEQRML CFRSSFLFQH WLIAMDLMAP IRAAPA
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G08560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.13e-81uncharacterized protein LOC107275325
TrEMBLA0A0D9WXL70.0A0A0D9WXL7_9ORYZ; Uncharacterized protein
STRINGLPERR07G08560.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.16e-15NAC domain containing protein 47