PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G07240.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 326aa    MW: 35634.4 Da    PI: 4.3632
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G07240.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.47.7e-125812954128
              NAM  54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +e +fF++++ k+ +gkr++r +   g+W+ +         +g+  + k +L f+ ++ +kg ++ Wvmhey+l
  LPERR07G07240.1  58 RGDEAFFFVEAHAKNGKGKRQKRtVEGGGFWQGQRMCG--GGGGGQIQWRKYMLSFF-NEGEKG-SSGWVMHEYAL 129
                      45699******************555599**9654432..23267777888889999.455554.89*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.1971148IPR003441NAC domain
SuperFamilySSF1019414.84E-1456148IPR003441NAC domain
PfamPF023654.5E-760129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTQAGDTTTQ RTLGEEKQCD RCSALRRLDS IVRRKGHLTS MQGQLDGMVQ KLLLDHGRGD  60
EAFFFVEAHA KNGKGKRQKR TVEGGGFWQG QRMCGGGGGG QIQWRKYMLS FFNEGEKGSS  120
GWVMHEYALT APADLASSQP WLYRVRFSGY GKKRKREPGC LGVNDEDDGG ERAPTRRHVA  180
EPVPPPAAPT DDLPHLMAVS AEQAGVGSAA ETTASVVNSS ELMGDSSVLL PDILYGDNDD  240
QKLFQTELDM PDLFDLQAGE AGASCDAAQE QSEMSPSLEN QSYYSSSGVV DGEETAWFDL  300
EFPDNIDEVL SSLNFTMDDL FDLPVD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G07240.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.13e-65uncharacterized protein LOC107275325
TrEMBLA0A0D9WX600.0A0A0D9WX60_9ORYZ; Uncharacterized protein
STRINGLPERR07G07240.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137