PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G05530.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 607aa    MW: 65292.7 Da    PI: 4.4387
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G05530.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.21.5e-23101421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      lppG++F+P+d +lv  yL ++++g++l+l+ vi ++d +++ Pw+L + +  + +e +fF k++ k+ +g+r++r +   g+W+ +     v+
  LPERR07G05530.1  10 LPPGLKFDPSDGDLVGGYLLARIQGNPLPLDGVILNADPLSSPPWRLLADHGRRGDEAFFFGKARAKNGKGSRQKRtVEGGGFWQGQRM---VV 100
                      79****************************999**************877777888********************555599**96654...33 PP

              NAM  94 sk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +          + e  + k +L f  ++ +kg ++ Wvmhey++
  LPERR07G05530.1 101 DGerllvpdsgGLEIAWRKYVLSFL-ADGEKG-SSGWVMHEYAI 142
                      3212233455444447888899999.555554.89*******86 PP
2NAM77.43.4e-243304571128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      l pGf+F P+d +lv  yL ++++g++l+l+ vi e+d +++ Pw+L ++ +++ +e +fF+ ++ k+ +g+r++r +   g+W+ +  + +  
  LPERR07G05530.1 330 LSPGFKFVPSDGDLVGGYLLARIQGNPLPLDGVILEADPLSSPPWRLLAE-HGRGDEAFFFADARAKNGKGRRQRRtVEGGGFWQGQRMSVDGG 422
                      579***************************999**************744.456789*******************555599**9776655544 PP

              NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +   + e  + k +L f+ ++ +kg ++ Wvmhey++
  LPERR07G05530.1 423 AGdgGLEMRWRKYVLSFF-ADGEKG-SSGWVMHEYAI 457
                      4343556689999*****.455554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-303161IPR003441NAC domain
PROSITE profilePS5100527.73510161IPR003441NAC domain
PfamPF023652.2E-1311141IPR003441NAC domain
SuperFamilySSF1019416.02E-30327476IPR003441NAC domain
PROSITE profilePS5100528.977330476IPR003441NAC domain
PfamPF023653.4E-14332456IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MAAAAAADSL PPGLKFDPSD GDLVGGYLLA RIQGNPLPLD GVILNADPLS SPPWRLLADH  60
GRRGDEAFFF GKARAKNGKG SRQKRTVEGG GFWQGQRMVV DGERLLVPDS GGLEIAWRKY  120
VLSFLADGEK GSSGWVMHEY AITAPAEVAS SATRLYRIRF SGHGKKRKRE PENQSSSHDD  180
NGGGRARRKT EDALLQDLAP ASPTVPLAAA DGADQGLVDN YSRLFDALGE IDVDELQSAL  240
REFAAPDMFV SPPEAEADAC AGDSISDGAG QGLMADYSLL FDDLGEIIDV DGLRSALREF  300
AAPDMIVSLP EGVMEAPNLT DFAAKSADAL SPGFKFVPSD GDLVGGYLLA RIQGNPLPLD  360
GVILEADPLS SPPWRLLAEH GRGDEAFFFA DARAKNGKGR RQRRTVEGGG FWQGQRMSVD  420
GGAGDGGLEM RWRKYVLSFF ADGEKGSSGW VMHEYAITAP AEVASSTKRL YRIRFSGHGK  480
KRKREPENQS SSHDNGGDRA RRKTEDALLQ DLAPASAPVP PRVADDDQGL VDNYSRLFDA  540
FGEIDVEELQ SALLEFAAPD MFVSPPEDEA DAVTLSAEME APKIVDEDDL SCINFDFDVD  600
AALAAWS
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G05530.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.13e-87uncharacterized protein LOC107275325
TrEMBLA0A0D9WWJ70.0A0A0D9WWJ7_9ORYZ; Uncharacterized protein
STRINGLPERR07G05530.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02250.14e-15NAC domain containing protein 5