PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G03950.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 280aa    MW: 30531.3 Da    PI: 4.3572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G03950.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.95.9e-21131342127
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                        G++F+P+de+lv+ yL ++++g++l+l+ +i e+d +++ P +L + +  + +e +fF++++ k+++gkr++r +   g+W+ +      ++
  LPERR07G03950.1  13 LLGLKFSPSDEDLVTSYLLRRLQGNPLPLHGIILEADPLSSPPGKLLADHGLGGDEGFFFAEARAKNNKGKRQKRtVEGGGFWQGQRMCGGGME 106
                      579**************************999**************8777778899*******************555599**98776555555 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyr 127
                            +   +L f+ ++ +kg ++ Wvmhe +
  LPERR07G03950.1 107 ---GIAWSMYMLSFF-AEGEKG-SSGWVMHELA 134
                      ...567888999999.445554.79******75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-2510154IPR003441NAC domain
PROSITE profilePS5100524.69212154IPR003441NAC domain
PfamPF023658.6E-1315133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MAVGGGANGD RLLLGLKFSP SDEDLVTSYL LRRLQGNPLP LHGIILEADP LSSPPGKLLA  60
DHGLGGDEGF FFAEARAKNN KGKRQKRTVE GGGFWQGQRM CGGGMEGIAW SMYMLSFFAE  120
GEKGSSGWVM HELAITSPPE LASSPVRLYR VRFSGHGKKR RRQPESEEGE PKRTRTEDAL  180
LQDQGCSGMM DEFSSSMVFG DLPWLIDLSP AEEPDAARTC LSLEENQSNS LSGVVDDGEA  240
STLCDFKIPE SLDEVFSCID FSFLDTMDFS MDGLFDLPAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G03950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025882797.17e-88NAC transcription factor 32
TrEMBLA0A0D9WVZ70.0A0A0D9WVZ7_9ORYZ; Uncharacterized protein
STRINGLPERR07G03950.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.29e-12NAC domain containing protein 41