PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR06G11390.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 296aa    MW: 32073.6 Da    PI: 4.0999
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR06G11390.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.21.3e-2281421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk.rknratk..sgyWkatgkdke 91 
                      lppG++F+P+d elv +yL ++++g++l+l+ +i ++d +++ Pw+L + +  + +e +fF +++ k+ +g+ r++r+++   g+W+ +     
  LPERR06G11390.1   8 LPPGLKFDPSDGELVGRYLLPRIQGNPLPLDGAILDADPLSSPPWRLLADHGRRGDEAFFFDEARAKNGKGSsRQKRTVEegGGFWQGQRMA-- 99 
                      79****************************999**************8777777889******9999998543888876655889*966552.. PP

              NAM  92 vlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      v  +        + e  + k +L f+ ++ +kg ++ Wvm ey++
  LPERR06G11390.1 100 VDGErllvpdagGLEISWRKYVLSFF-ADGEKG-SSGWVMYEYAI 142
                      2222223356655555888899***9.455554.89*******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-296161IPR003441NAC domain
PROSITE profilePS5100526.9068161IPR003441NAC domain
PfamPF023651.4E-149141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MAAPPDALPP GLKFDPSDGE LVGRYLLPRI QGNPLPLDGA ILDADPLSSP PWRLLADHGR  60
RGDEAFFFDE ARAKNGKGSS RQKRTVEEGG GFWQGQRMAV DGERLLVPDA GGLEISWRKY  120
VLSFFADGEK GSSGWVMYEY AITAPAELAS STTRLYRIRF SGYGKKRKRE PENQSSSHAS  180
RKTENALLQD LAPVPPLAAA DDDSISDSAD QGLMMDDYSL VFDSLPEIID VDELQSTLRE  240
FSAPDMFVSP QEAEADACAG AATSSADLGV AEIVDEDDLS CIDFDFDVDA ALAAWS
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR06G11390.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025882797.18e-94NAC transcription factor 32
TrEMBLA0A0D9WPW50.0A0A0D9WPW5_9ORYZ; Uncharacterized protein
STRINGLPERR06G11390.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02250.14e-13NAC domain containing protein 5