PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR04G14690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 385aa    MW: 42966.4 Da    PI: 8.9381
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR04G14690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM331.7e-10621717126
              NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                      F+Pt e++v+ yL  + + +   l  +++++d+y ++P  L + + a +++ ew+fF+ r+++ + g+r  r +  g  + + + +   +++g 
  LPERR04G14690.1  62 FDPTVEDIVTIYLPCRRALRCDALPVHVHDADLYGAHPALLASVYPAaNKRfEWFFFAFRRRRCPGGRR--R-AGPGEYRLSQEAR---HRGG- 148
                      9************87766655445446**************84333313347***********997643..3.3557666554433...3233. PP

              NAM  99 lvglkktLvfykgrapkgektdWvmhey 126
                           +++ +y    ++g++t+W m ey
  LPERR04G14690.1 149 -DAYSHSFRYY----EDGKETEWRMVEY 171
                      .468899****....68889*******9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.42956198IPR003441NAC domain
PfamPF023652.5E-761171IPR003441NAC domain
SuperFamilySSF1019419.55E-1961197IPR003441NAC domain
PROSITE profilePS5100513.637215379IPR003441NAC domain
SuperFamilySSF1019417.06E-19227379IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MRRPNQNQAA PEAAAASLRE EEIDDGWVFL AGRSSSRVAK PPPSPSSMAR AVASSAGGQL  60
PFDPTVEDIV TIYLPCRRAL RCDALPVHVH DADLYGAHPA LLASVYPAAN KRFEWFFFAF  120
RRRRCPGGRR RAGPGEYRLS QEARHRGGDA YSHSFRYYED GKETEWRMVE YGDRRRDVGD  180
GGGGSEGFEL VVCKVYLARG GAVHEMLGAD RAALASRGRG DEAAKPQVLV QLYLATLRMG  240
NPLACRVHRA TARDVLGAHP AVITAVLPAA NDRCEWLFAA VRQRRRGEHG AARPRKAGPG  300
EYVAVRECRV VDGRSRDMGY RIVFWYREDD DEARRLSPTE WWMEEYGFGP DFPYGELPAP  360
VGWARGEDEE LVVYKVYAKL VGGRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR04G14690.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015634867.11e-176uncharacterized protein LOC9267434
TrEMBLA0A0D9W6Y80.0A0A0D9W6Y8_9ORYZ; Uncharacterized protein
STRINGLPERR04G14690.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP147671819