PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR04G14690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | NAC | ||||||||
Protein Properties | Length: 385aa MW: 42966.4 Da PI: 8.9381 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33 | 1.7e-10 | 62 | 171 | 7 | 126 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 F+Pt e++v+ yL + + + l +++++d+y ++P L + + a +++ ew+fF+ r+++ + g+r r + g + + + + +++g LPERR04G14690.1 62 FDPTVEDIVTIYLPCRRALRCDALPVHVHDADLYGAHPALLASVYPAaNKRfEWFFFAFRRRRCPGGRR--R-AGPGEYRLSQEAR---HRGG- 148 9************87766655445446**************84333313347***********997643..3.3557666554433...3233. PP NAM 99 lvglkktLvfykgrapkgektdWvmhey 126 +++ +y ++g++t+W m ey LPERR04G14690.1 149 -DAYSHSFRYY----EDGKETEWRMVEY 171 .468899****....68889*******9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.429 | 56 | 198 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-7 | 61 | 171 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.55E-19 | 61 | 197 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.637 | 215 | 379 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.06E-19 | 227 | 379 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MRRPNQNQAA PEAAAASLRE EEIDDGWVFL AGRSSSRVAK PPPSPSSMAR AVASSAGGQL 60 PFDPTVEDIV TIYLPCRRAL RCDALPVHVH DADLYGAHPA LLASVYPAAN KRFEWFFFAF 120 RRRRCPGGRR RAGPGEYRLS QEARHRGGDA YSHSFRYYED GKETEWRMVE YGDRRRDVGD 180 GGGGSEGFEL VVCKVYLARG GAVHEMLGAD RAALASRGRG DEAAKPQVLV QLYLATLRMG 240 NPLACRVHRA TARDVLGAHP AVITAVLPAA NDRCEWLFAA VRQRRRGEHG AARPRKAGPG 300 EYVAVRECRV VDGRSRDMGY RIVFWYREDD DEARRLSPTE WWMEEYGFGP DFPYGELPAP 360 VGWARGEDEE LVVYKVYAKL VGGRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR04G14690.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015634867.1 | 1e-176 | uncharacterized protein LOC9267434 | ||||
TrEMBL | A0A0D9W6Y8 | 0.0 | A0A0D9W6Y8_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR04G14690.1 | 0.0 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14767 | 18 | 19 |