PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR02G10500.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 333aa    MW: 37642.3 Da    PI: 4.5389
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR02G10500.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.41.8e-16101471127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      l pGf+F+Ptde lv  yL + ++ ++l+    +   d  ++ Pw L +++    e ++ yf ++++    +g++++ ++  g+W ++ ++ + 
  LPERR02G10500.1  10 LSPGFKFDPTDEMLVELYLLPYLRYRRLPYPGLVFIDDPRRLPPWLLLRHHGRggEGEDAYFIAPAAG--GKGRQPRSVAGGGRWVKQRTNSSS 101
                      579************************99977666669*********743333224446688877655..45667777999*****99998888 PP

              NAM  93 lskkgel...........vglkktLvfykgrapkgektdWvmheyr 127
                       +k++++            + k +L f+   ++++ +t Wvmhe +
  LPERR02G10500.1 102 EKKGSNNndlvvfggeafRWEKSSLNFHCHADRRSGSTGWVMHEIA 147
                      8873333456677777779*********98888889********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-264168IPR003441NAC domain
PROSITE profilePS5100521.45110168IPR003441NAC domain
PfamPF023654.2E-1312146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MVTAAESHGL SPGFKFDPTD EMLVELYLLP YLRYRRLPYP GLVFIDDPRR LPPWLLLRHH  60
GRGGEGEDAY FIAPAAGGKG RQPRSVAGGG RWVKQRTNSS SEKKGSNNND LVVFGGEAFR  120
WEKSSLNFHC HADRRSGSTG WVMHEIAVFP PPGSAVVVDH RVCHIAFTGH GQNRNRVPDG  180
YVVDDFDVQM NEEQQQEQQS NQQLLPVNQD CFLQQQPLAG SNLERFLDQE QQSNQDQGYY  240
GGDYFADQQN LQCFVQEQQQ QINQGQELAY AYGEQNQCYT APEQQQQSNQ GDDVTQWQQP  300
DGLDGGGALS WREYMDDAEM QHIIDGLLAD FTL
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR02G10500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649258.15e-52uncharacterized protein LOC107275324
TrEMBLA0A0D9VEW50.0A0A0D9VEW5_9ORYZ; Uncharacterized protein
STRINGLPERR02G10500.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143261123