PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj5g3v0550200.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | WRKY | ||||||||
Protein Properties | Length: 311aa MW: 35000.1 Da PI: 8.0319 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.7 | 6.3e-25 | 134 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrK Gq++ kg+ +pr Y+ Ct+agCpv+k ver+ ++ k v++tY+g+Hnhe Lj5g3v0550200.2 134 DDGYRWRKSGQRPSKGNLMPRRYFMCTTAGCPVRKTVERNLHNLKNVITTYKGRHNHE 191 8********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.3E-26 | 121 | 193 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.103 | 128 | 193 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-22 | 130 | 193 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.6E-22 | 133 | 192 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.4E-19 | 134 | 191 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MLMGDNVVQI LLAPTERHAT KYSNDQYNDE KQVNLTIHEI KKGKMPMYCY KEAGAKVDEG 60 RPVTENLQLG GKSNKNKVTQ GSTSPSKEVD VAVVAHDSGS KRKSLDYYNK ALLRLIHPLP 120 KVEVQVESIV DVPDDGYRWR KSGQRPSKGN LMPRRYFMCT TAGCPVRKTV ERNLHNLKNV 180 ITTYKGRHNH EVPLEKHKDC SINVDDFHKA ANSLRTVAMS GNANIRGPEA NQEDENDFLR 240 LTLGQNFNND HVNVRSSSTN HIPGPEANQE DDNDFLRLTL GQNFNIDHVN VRSSSTNQIP 300 SINLEKDGDD I |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-22 | 124 | 193 | 8 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 1e-22 | 124 | 193 | 8 | 77 | Probable WRKY transcription factor 4 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj5g3v0550200.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 7e-29 | WRKY DNA-binding protein 33 |