PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj5g3v0483800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | WRKY | ||||||||
Protein Properties | Length: 141aa MW: 15567.4 Da PI: 6.6251 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.3 | 2e-10 | 3 | 32 | 30 | 59 |
TT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 30 agCpvkkkversaedpkvveitYegeHnhe 59 ++Cp+kkkv+r+++d +++ tY geHnh+ Lj5g3v0483800.2 3 PTCPAKKKVQRCTHDRSILAATYDGEHNHS 32 58***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 10.028 | 1 | 34 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0014 | 1 | 33 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-7 | 3 | 32 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.6E-9 | 3 | 32 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.1E-7 | 4 | 31 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MAPTCPAKKK VQRCTHDRSI LAATYDGEHN HSALDDSFRP SSSTPKGSSI ANNLSPTIIP 60 YDKEAMNNVF AISDWAQTNA RLYEDVIPQH VHGSNIKIED YISSVIKDPD FTTALAEAVA 120 HIITGQHKRQ SLNLNLDIPK E |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj5g3v0483800.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020206660.1 | 4e-55 | probable WRKY transcription factor 40 | ||||
Refseq | XP_020206662.1 | 4e-55 | probable WRKY transcription factor 40 | ||||
Refseq | XP_027939733.1 | 3e-55 | probable WRKY transcription factor 40 | ||||
TrEMBL | A0A371HC05 | 4e-57 | A0A371HC05_MUCPR; Putative WRKY transcription factor 40 (Fragment) | ||||
STRING | XP_004498813.1 | 8e-50 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 5e-13 | WRKY DNA-binding protein 40 |