PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj3g3v2938490.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | TALE | ||||||||
Protein Properties | Length: 750aa MW: 82061.6 Da PI: 6.8743 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.4 | 2.8e-09 | 428 | 465 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Lj3g3v2938490.3 428 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 465 554459******************************88 PP | |||||||
2 | BELL | 117.3 | 7.2e-38 | 291 | 362 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kk+kLls+l+eV+ rY+qy++q+ +vissFe+ +g+g+ak+Yt+lAlk+iS++FrcLkdai++qi Lj3g3v2938490.3 291 QRQELQMKKSKLLSMLDEVELRYRQYHNQMDMVISSFEQGTGYGAAKSYTTLALKTISKQFRCLKDAISSQI 362 69*********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.4E-55 | 217 | 360 | IPR006563 | POX domain |
Pfam | PF07526 | 8.6E-46 | 222 | 359 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.082 | 406 | 469 | IPR001356 | Homeobox domain |
SMART | SM00389 | 7.8E-10 | 409 | 473 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.70E-12 | 409 | 470 | No hit | No description |
SuperFamily | SSF46689 | 7.27E-17 | 410 | 475 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.9E-28 | 412 | 475 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 5.2E-18 | 426 | 465 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 750 aa Download sequence Send to blast |
MATYFHGNTS SEIESSAEGL QTLYLMNPNY VPYSDAPNML LVNPNTSIAA AGTSANALNL 60 SNFSHAPPPS SANNHHHHQQ QQQNHLVGFT IPSSNILGST TTNTTTGNSN HLGQHGISGG 120 FQSFAATTTP AVVATNPRAH YNLWGSIINQ TMSSVTTAAE TTPSNNSAYS AAVTVADDSG 180 YNNRGNQQSG LSLSLSSQQP SFRSLSGGEI GVPVSRSAGN GVILGSKYLK AVQEVLDEAV 240 KVGKEICEGE SMEGAPKNNK EKMRANIESE TSGIGENSGS NKQGAELSMA QRQELQMKKS 300 KLLSMLDEVE LRYRQYHNQM DMVISSFEQG TGYGAAKSYT TLALKTISKQ FRCLKDAISS 360 QIKTASKTLG DQDDCLGAKV EGSRLRYVDH HLRQQRALQQ LGMIQHNAWR PQRGLPERAV 420 SVLRAWLFEH FLHPYPKDSD KVMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYLEEIK 480 EQEQNNDNTN RSAKDQSSKE LWSASATNAT HESSSGALKL DQQINSFHSK PERLINNQNT 540 SPTEISNSDN NSLSTSPMGG GSFQSQYSGF HLAESSSEIQ IRSSPKKPRS SEMQQHFPGS 600 MNMEMKPGGE ETREANTEFD TERHNKDGYP LKTSGDENHG GGYGGAFSME DIGRFNVTDQ 660 LAPRFHGNGV SLTLGLPHND NLSLSATQHG FLPQNMHLGG RLEMETNENE FCGINNTTAP 720 PSSHSGTSYE NIDIQNRKRF AAQLLRNFVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 3e-16 | 415 | 473 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 3e-16 | 415 | 473 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 3e-16 | 415 | 472 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 3e-16 | 415 | 472 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj3g3v2938490.3 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019448874.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 isoform X1 | ||||
Refseq | XP_019448876.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 isoform X1 | ||||
TrEMBL | A0A4P1RD71 | 0.0 | A0A4P1RD71_LUPAN; Uncharacterized protein | ||||
STRING | XP_007132496.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-107 | BEL1-like homeodomain 1 |