PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v2385360.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 355aa    MW: 38173.2 Da    PI: 6.8988
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v2385360.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.16e-21279341163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +Lk+ l+el + +++l+ e+
  Lj3g3v2385360.1 279 DRELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENLSLKSDLNELAESSENLRVEN 341
                      689********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.1E-33199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.0E-22133258No hitNo description
Gene3DG3DSA:1.20.5.1703.6E-15273338No hitNo description
SMARTSM003384.7E-18279343IPR004827Basic-leucine zipper domain
PfamPF001701.6E-19280341IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.967281344IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-10282337No hitNo description
CDDcd147021.11E-20284332No hitNo description
PROSITE patternPS000360286301IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGNSEDETSI KIEKPSSPLT PEQINQANPP NFHVYPDWAA MQAYYGPGVN VPAYFNPAVA  60
SGHTPPPYMW GPPHPMMPPY GPPYAAFYSH GGVYTHPAVA IGPNSHGQGI SSSPAAGTPS  120
SMETPTKLSG NTDQGFIKKL KGFDGLAMSI GNCNAENAER GAENRLSQSV DTDGSSDGSD  180
GNTAGATRKR SYEGTPTTDG EGKTEIQDSP VSKETTASKK TLAVTPIRVA RNLVGPVVSS  240
GMTTPPELRN PSTVHSKTFS TSSPQPGGVL PPETWMQNDR ELKRERRKQS NRESARRSRL  300
RKQAETEELA RKVEALTAEN LSLKSDLNEL AESSENLRVE NATLREKLNN TQLGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295301RRSRLRK
2295302RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v2385360.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001341034.10.0G-box binding factor
RefseqXP_028207631.10.0common plant regulatory factor 1-like
SwissprotQ990891e-111CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2K3NQ830.0A0A2K3NQ83_TRIPR; Common plant regulatory factor 1-like protein
TrEMBLA0A2Z6N1M60.0A0A2Z6N1M6_TRISU; Uncharacterized protein
STRINGGLYMA16G03190.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.19e-83G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]