PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v1906610.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 465aa    MW: 51713.9 Da    PI: 6.4221
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v1906610.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-09178220345
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Lj3g3v1906610.1 178 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 220
                      568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-8170223No hitNo description
PfamPF077166.7E-7176222IPR004827Basic-leucine zipper domain
SMARTSM003381.5E-7176239IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415178222IPR004827Basic-leucine zipper domain
CDDcd147082.21E-22180232No hitNo description
SuperFamilySSF579597.5E-7180223No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141442.1E-34262337IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MRKSTRVGVE NDKGAERGMP SFNSELPFSN TCDSEWRTVD SFHVSDFGAF DQSYRLEDAV  60
DLGGNSVFDS LKLSGQTTFP GSVYIGNLHK LPTSVDKSSL TNQTEQCRLQ LQKVQSSNPG  120
TILVGDTEIL EEPTMADASP RTDISTDVDT DDRNQRFDRS ALAAVASDSS DRSKDKSDQK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR LKLTQLEQEL QRARQQGVFI SSSGDQAHTM  240
GGNGAMQFDA EYARWLEEQN RQINELRAAV NSHASDTELR MIVDGILAHY DEIFRLKGVA  300
AKADVFHLLS GMWKTPAERC FLWLGGFRPS ELLKLLVNQL EPLTEQQLMG ITNLQQSSQQ  360
GEDALSQGME ALQQSLAETL STGTPASSGS SGNVANYMGQ MAMAMGKLGT LDGFIRQADN  420
LRQQTLQQMH RILTTRQSAR ALLAITDYFS RLRALSSLWL ARPRD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.127640.0cell culture| root
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v1906610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027354194.10.0transcription factor TGA2.2-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A1S3W2690.0A0A1S3W269_VIGRR; transcription factor TGA2.2 isoform X1
TrEMBLA0A4D6LAX60.0A0A4D6LAX6_VIGUN; Transcription factor TGA
STRINGXP_007133721.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-152TGACG motif-binding factor 6