PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj3g3v1855300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 206aa MW: 22737.7 Da PI: 9.6415 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.3 | 1.9e-09 | 180 | 206 | 5 | 31 |
CHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeL 31 +r++r++kNRe+A rsR+RK a++ eL Lj3g3v1855300.1 180 RRQKRMIKNRESAARSRARKHAYTNEL 206 79**********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.6E-8 | 169 | 206 | No hit | No description |
Pfam | PF00170 | 2.7E-7 | 180 | 206 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.2E-5 | 180 | 206 | No hit | No description |
CDD | cd14707 | 1.10E-16 | 180 | 206 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 183 | 198 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MDNEGTAQAN QAAPQRQGSL SLSGALSKKT VDEVWRDIQQ NKDSEKKPRD RQPTLGEMTL 60 EDFLVKAGVV SDASSNKKND GTTAGIDPNV VVPQFPPQGQ WIPYPQPQYQ HPQQNLMGIY 120 MPSQGIAQSL HMGGCALLDV SYADNQVALP PPLMGTVSDM QIPGRKRSAP EDMVGKTVER 180 RQKRMIKNRE SAARSRARKH AYTNEL |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.5346 | 1e-115 | floral bud| pod |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj3g3v1855300.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP010269 | 0.0 | AP010269.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT33A07, TM0672, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027355242.1 | 1e-116 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 6e-44 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A445JIT3 | 1e-110 | A0A445JIT3_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform B | ||||
STRING | GLYMA08G24340.1 | 1e-109 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1320 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-38 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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