PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v1739270.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 321aa    MW: 35630.1 Da    PI: 8.987
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v1739270.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.4e-14251298553
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                      +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++ +k+ +el+
  Lj3g3v1739270.1 251 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERPRKR-KELE 298
                      79************************************987744.4555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-13240297No hitNo description
SMARTSM003381.7E-9247303IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852249294IPR004827Basic-leucine zipper domain
CDDcd147071.50E-22251305No hitNo description
SuperFamilySSF579592.75E-10251296No hitNo description
PfamPF001701.3E-11251294IPR004827Basic-leucine zipper domain
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGIQTMGSQG GGDSNGKRSQ LQPLTRQNSM YGLTLDEVHN QLGDLGRPLS SLNLDELLKS  60
VWTVETSQSL EMDNEGTAQA NQAAPQRQGS LSLSGALSKK TVHEVWRDIQ QNKDSEKKPR  120
DRQPTLGEMT LEDFLVKAGV VADAPSNKKN DGTTAGIDPN VVVPQFPPQG QWIPYPQPQY  180
QHPQQSLMGI YVPSQGIAQS LHMGGCASLD VSYADNQVAL PPPLMGTVSD TQTPGRKRSA  240
PEDMVEKTVE RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENER PRKRKELEQM  300
LPCTPPPEPK YQLRRIASAP L
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.53461e-169floral bud| pod
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v1739270.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0096980.0AP009698.1 Lotus japonicus genomic DNA, clone: LjT02O17, TM1725, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027355242.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES33e-89AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A445JIT20.0A0A445JIT2_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform A
TrEMBLI1KVX10.0I1KVX1_SOYBN; Uncharacterized protein
STRINGGLYMA08G24340.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-71ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]