PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj3g3v0370510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 325aa MW: 34854.6 Da PI: 6.1851 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 230 | 288 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l se+ Lj3g3v0370510.1 230 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTTGLNSEN 288 9*********************************************9999888888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 226 | 290 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.944 | 228 | 291 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-9 | 230 | 285 | No hit | No description |
Pfam | PF00170 | 2.4E-9 | 230 | 288 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.8E-11 | 230 | 282 | No hit | No description |
CDD | cd14703 | 2.08E-25 | 231 | 280 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MDKDKSVGHG GGLPPPPGRY SGYSPPGTAF NVKSEPPAGT SSYPQLVPGT SSDVNTHFGH 60 GMSTGAADSS GFSHDISRMP DNPPRNRGHR RAHSEILTLP DDISFDSDLG VVGGADGPSF 120 SDDTEEDLLS MYLDMDKFNS SSATSSFQMG EPSNAGGPSG SMPGQGFSAQ NIAVGGSERR 180 VRHQHSQSMD GSTSIKPEML VSGSDEMSGV DSKKAMSAAK LAELALIDPK RAKRIWANRQ 240 SAARSKERKM RYIAELERKV QTLQTEATSL SAQLTLLQRD TTGLNSENSE LKLRLQTMEQ 300 QVHLQDALND ALKEEIQHLK ILAGQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.22515 | 0.0 | protoplast |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj3g3v0370510.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027341681.1 | 0.0 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-131 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A1S2XBR6 | 0.0 | A0A1S2XBR6_CICAR; probable transcription factor PosF21 | ||||
STRING | XP_004486898.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5517 | 32 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-145 | bZIP family protein |
Publications ? help Back to Top | |||
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