PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v3188470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | WRKY | ||||||||
Protein Properties | Length: 471aa MW: 51866 Da PI: 5.336 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.6e-30 | 251 | 309 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg+nWrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r+aed +v+++tYeg+H h+ Lj2g3v3188470.1 251 ADGCNWRKYGQKMAKGNPCPRAYYRCTMStGCPVRKQVQRCAEDRSVLITTYEGQHSHP 309 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.5E-33 | 235 | 311 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.31E-27 | 243 | 311 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.562 | 245 | 311 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-36 | 250 | 310 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-26 | 252 | 309 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MEATLNNDNA ISKCNSTSLN PIMMFRGNRL IVDELDFFDE EKKKKSEDDD QMVHTTSVEE 60 PDLDTSLDLV TKNTGSHRST STDEDATLET VDDKRNNEFV GVLAELQQMN AENQRLRELI 120 DEMNDSYNAL RMQLVELKQR QHHHGINKKD ADPKDEQPLE SKLTMVELLK CKEQKNCTRK 180 DVALETDKVE LSGSESAKNR MLVKPSSDQT FQGCKVPRLS SFNEQASSET MSMIKKARVS 240 VRARSETSMI ADGCNWRKYG QKMAKGNPCP RAYYRCTMST GCPVRKQVQR CAEDRSVLIT 300 TYEGQHSHPL PPTAQAMAST TSAAASMLLS GSMPSADHGL INPTILETAS LHSSAQQNMA 360 TLSASAPFPT ITLDLTQTDS TNSSQQLQSD QQQSQLSLLT PLLAQNFMSV PKIFGQNLCD 420 QNQTNVLANT VNAATAAITS DPNFTATLVA AITSVLGSSH QNNNGGDQQC N |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-23 | 237 | 312 | 1 | 75 | WRKY transcription factor 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v3188470.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027368591.1 | 0.0 | probable WRKY transcription factor 31 | ||||
TrEMBL | A0A371FP64 | 0.0 | A0A371FP64_MUCPR; WRKY transcription factor 6 (Fragment) | ||||
STRING | XP_007142321.1 | 1e-151 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13913 | 12 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 3e-64 | WRKY family protein |